Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 AC013244.2-201ENST00000603396 103 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 U6.81-201ENST00000612550 106 ntBASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHB3Q9Y5E6 SNORD45.1-201ENST00000363181 77 ntBASIC2.65□□□□□ -1.99
PCDHB3Q9Y5E6 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-141P-201ENST00000410499 105 ntBASIC2.65□□□□□ -1.99
PCDHB3Q9Y5E6 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
PCDHB3Q9Y5E6 MIR4446-201ENST00000578505 67 ntBASIC2.65□□□□□ -1.99
PCDHB3Q9Y5E6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-824P-201ENST00000363724 104 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 AC108938.1-201ENST00000451204 136 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 MIR18B-201ENST00000454574 71 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 AP003716.2-201ENST00000528260 108 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 MIR3945-201ENST00000581853 98 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 MIR4511-201ENST00000582784 87 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 FO624990.1-201ENST00000636373 85 ntBASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHB3Q9Y5E6 SNORA24B-201ENST00000384176 131 ntBASIC2.63□□□□□ -1.99
PCDHB3Q9Y5E6 SNORD116-24-201ENST00000384549 92 ntBASIC2.63□□□□□ -1.99
PCDHB3Q9Y5E6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHB3Q9Y5E6 MTRNR2L2-201ENST00000604882 87 ntBASIC2.63□□□□□ -1.99
PCDHB3Q9Y5E6 AC245884.12-201ENST00000615364 59 ntBASIC2.63□□□□□ -1.99
PCDHB3Q9Y5E6 AC103706.3-201ENST00000636297 85 ntBASIC2.63□□□□□ -1.99
PCDHB3Q9Y5E6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 Y_RNA.56-201ENST00000362798 112 ntBASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-654P-201ENST00000364373 107 ntBASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 MIR1185-1-201ENST00000408598 86 ntBASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 RNA5SP95-201ENST00000410319 137 ntBASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-250P-201ENST00000516958 103 ntBASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 GHRLOS.1-201ENST00000610995 70 ntBASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDHB3Q9Y5E6 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-1216P-201ENST00000362590 107 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-580P-201ENST00000365159 107 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-1054P-201ENST00000411293 104 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 JTBP1-201ENST00000441314 247 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 SNORA31.25-201ENST00000517242 134 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 SNRPGP19-201ENST00000603826 189 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 AC131280.1-202ENST00000624067 4211 ntBASIC2.61□□□□□ -1.99
PCDHB3Q9Y5E6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 SNORD113.1-201ENST00000363280 73 ntBASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-935P-201ENST00000410371 100 ntBASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 MIR6715A-201ENST00000615929 79 ntBASIC2.6□□□□□ -1.99
PCDHB3Q9Y5E6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-604P-201ENST00000390917 100 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-1052P-201ENST00000411398 104 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 AC097635.1-201ENST00000450678 155 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-947P-201ENST00000516264 106 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 RNU6-719P-201ENST00000516671 104 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 Y_RNA.697-201ENST00000516776 113 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
PCDHB3Q9Y5E6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHB3Q9Y5E6 Y_RNA.13-201ENST00000362403 112 ntBASIC2.58□□□□□ -2
PCDHB3Q9Y5E6 MIR451A-201ENST00000385059 72 ntBASIC2.58□□□□□ -2
PCDHB3Q9Y5E6 AC110620.1-201ENST00000416042 228 ntBASIC2.58□□□□□ -2
PCDHB3Q9Y5E6 AL133373.1-201ENST00000497098 94 ntBASIC2.58□□□□□ -2
PCDHB3Q9Y5E6 MIR4529-201ENST00000578110 78 ntBASIC2.58□□□□□ -2
PCDHB3Q9Y5E6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 MIR103A2-201ENST00000362154 78 ntBASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 RNA5SP68-201ENST00000363885 119 ntBASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 RNU7-185P-201ENST00000459215 60 ntBASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 MIR6082-201ENST00000613604 109 ntBASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
PCDHB3Q9Y5E6 AC023934.1-201ENST00000574529 2389 ntBASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 RNU6-669P-201ENST00000365575 107 ntBASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 RNU6-439P-201ENST00000384188 106 ntBASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PCDHB3Q9Y5E6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
PCDHB3Q9Y5E6 RNA5SP264-201ENST00000363115 107 ntBASIC2.55□□□□□ -2
PCDHB3Q9Y5E6 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
PCDHB3Q9Y5E6 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 MIR633-201ENST00000384821 98 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 MIR599-201ENST00000385069 95 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 RNA5SP282-201ENST00000516355 108 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 MIR514B-201ENST00000516774 80 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 AC015688.6-201ENST00000577737 104 ntBASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
PCDHB3Q9Y5E6 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
PCDHB3Q9Y5E6 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms