Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 AC009474.2-201ENST00000451383 136 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 RNU6-539P-201ENST00000516665 103 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
RC3H2Q9HBD1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 RNU6-161P-201ENST00000363051 106 ntBASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 RNU6-203P-201ENST00000384038 104 ntBASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
RC3H2Q9HBD1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RC3H2Q9HBD1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 BX276092.1-201ENST00000427368 251 ntBASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 snoU13.2-201ENST00000459201 104 ntBASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 RNU6-1108P-201ENST00000516308 104 ntBASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 MIR4500-201ENST00000579472 76 ntBASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 U6.109-201ENST00000636749 87 ntBASIC2.08□□□□□ -2.08
RC3H2Q9HBD1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 RNU6-571P-201ENST00000384128 107 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 MIR563-201ENST00000385080 79 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 MIR520H-201ENST00000385126 88 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 MIR653-201ENST00000385279 96 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 RNU6-1015P-201ENST00000517121 99 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 MIR4255-201ENST00000579351 72 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 snoU13.31-201ENST00000607291 104 ntBASIC2.07□□□□□ -2.08
RC3H2Q9HBD1 RNU6-811P-201ENST00000384069 107 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 RNU6-411P-201ENST00000384451 107 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 MIR194-1-201ENST00000384892 85 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 MIR1302-7-201ENST00000408841 72 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 RNU6-75P-201ENST00000515944 104 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 PRELID3BP2-201ENST00000605362 201 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 MIR6740-201ENST00000618268 113 ntBASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
RC3H2Q9HBD1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 RNU6-132P-201ENST00000383863 107 ntBASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 SNORD13-201ENST00000459299 104 ntBASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 FGF7P7-201ENST00000514120 227 ntBASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
RC3H2Q9HBD1 SNORD36A-201ENST00000362874 73 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 Y_RNA.119-201ENST00000363301 96 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 RNA5SP190-201ENST00000365222 118 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 SNORA72.6-201ENST00000384520 129 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 MIR635-201ENST00000384830 98 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 MIR588-201ENST00000384900 83 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 Y_RNA.660-201ENST00000516002 120 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 SNORD111.1-201ENST00000516421 86 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 SNORA18.5-201ENST00000516616 101 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 AC008163.1-202ENST00000636004 2889 ntBASIC2.04□□□□□ -2.08
RC3H2Q9HBD1 MIR30D-201ENST00000362283 70 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 SNORD41-201ENST00000386967 70 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 AC004965.1-201ENST00000413033 213 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 AC023790.1-201ENST00000482174 347 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 MIR3064-201ENST00000581130 66 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 MIR4484-201ENST00000582855 83 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 MIR3192-201ENST00000584920 77 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
RC3H2Q9HBD1 RNA5SP48-201ENST00000363969 126 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 Y_RNA.283-201ENST00000364798 112 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 MIR516A2-201ENST00000384888 90 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 MIR516A1-201ENST00000385033 90 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 MIR1265-201ENST00000408444 86 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 JTBP1-201ENST00000441314 247 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 HSPE1P24-201ENST00000450782 238 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 RNU6-250P-201ENST00000516958 103 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 RNU6-448P-201ENST00000517052 107 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 SNORA4-201ENST00000584302 138 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 AC104996.3-201ENST00000590718 94 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
RC3H2Q9HBD1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 RNA5SP259-201ENST00000365541 109 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 SNORD90-201ENST00000391145 111 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 RNU6-380P-201ENST00000410207 107 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 RNU6-687P-201ENST00000516443 89 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 MIR4713-201ENST00000582691 75 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 MIR4536-1-201ENST00000583537 88 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 MIR4781-201ENST00000585250 76 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 uc_338.6-201ENST00000613544 171 ntBASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RC3H2Q9HBD1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms