Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC138749.4-201ENST00000563970 127 ntBASIC0.79□□□□□ -2.28
UPF2Q9HAU5 SNORD92-201ENST00000585078 85 ntBASIC0.79□□□□□ -2.28
UPF2Q9HAU5 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
UPF2Q9HAU5 SNORD114-10-201ENST00000363409 72 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 Y_RNA.466-201ENST00000384294 113 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 Y_RNA.549-201ENST00000384657 102 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 MIR1257-201ENST00000408490 117 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 SNORD93-201ENST00000408813 74 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.78□□□□□ -2.28
UPF2Q9HAU5 RNU7-102P-201ENST00000458948 62 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 MIR3163-201ENST00000581592 73 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
UPF2Q9HAU5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 Y_RNA.213-201ENST00000364178 111 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 MIR520F-201ENST00000384824 87 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 SNORD105-201ENST00000386910 85 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 MIR938-201ENST00000401216 83 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 RNU4-83P-201ENST00000410863 133 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 RNU7-156P-201ENST00000517214 74 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
UPF2Q9HAU5 RNA5SP205-201ENST00000364653 136 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 Y_RNA.346-201ENST00000365385 112 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 Y_RNA.362-201ENST00000365518 110 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 SNORA19-201ENST00000384737 128 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 MIR520H-201ENST00000385126 88 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 MIR92A1-201ENST00000385233 78 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 SNORD99-201ENST00000408612 74 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 RNU7-2P-201ENST00000516096 62 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 CYP3A137P-201ENST00000562436 69 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 U2.22-201ENST00000636441 106 ntBASIC0.76□□□□□ -2.29
UPF2Q9HAU5 SNORD115-35-201ENST00000365122 82 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 RNU6-1117P-201ENST00000384525 104 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 AC008267.6-201ENST00000441664 139 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 MIR6082-201ENST00000613604 109 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 U6.109-201ENST00000636749 87 ntBASIC0.75□□□□□ -2.29
UPF2Q9HAU5 RNU6-403P-201ENST00000363163 104 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 RNA5SP133-201ENST00000363368 119 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 MIR548A1-201ENST00000385041 97 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 AL606753.1-201ENST00000427435 87 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 Y_RNA.649-201ENST00000459077 103 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 RNU6-479P-201ENST00000516348 105 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 RNU6-531P-201ENST00000516694 104 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 AC090897.1-201ENST00000580909 226 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.74□□□□□ -2.29
UPF2Q9HAU5 MIR376B-201ENST00000614515 100 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 U6.95-201ENST00000636931 70 ntBASIC0.74□□□□□ -2.29
UPF2Q9HAU5 MIR34C-201ENST00000384831 77 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 MIR573-201ENST00000384964 99 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 RNU6-679P-201ENST00000391003 106 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 SNORD77B-201ENST00000391112 67 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 RNU6-521P-201ENST00000516663 105 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 RNU6-789P-201ENST00000517105 102 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 MTND5P34-201ENST00000568888 325 ntBASIC0.73□□□□□ -2.29
UPF2Q9HAU5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.73□□□□□ -2.29
UPF2Q9HAU5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
UPF2Q9HAU5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
UPF2Q9HAU5 RNY1P2-201ENST00000364820 117 ntBASIC0.72□□□□□ -2.29
UPF2Q9HAU5 RNU6-429P-201ENST00000384582 108 ntBASIC0.72□□□□□ -2.29
UPF2Q9HAU5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
UPF2Q9HAU5 RNU7-48P-201ENST00000458875 63 ntBASIC0.72□□□□□ -2.29
UPF2Q9HAU5 RNU6-1006P-201ENST00000516998 103 ntBASIC0.72□□□□□ -2.29
UPF2Q9HAU5 AC007012.1-201ENST00000567192 175 ntBASIC0.72□□□□□ -2.29
UPF2Q9HAU5 MIR4679-2-201ENST00000578358 77 ntBASIC0.72□□□□□ -2.29
UPF2Q9HAU5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.72□□□□□ -2.29
UPF2Q9HAU5 RNU6-363P-201ENST00000362895 105 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNY4P6-201ENST00000363667 96 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNU4-67P-201ENST00000364569 141 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 Y_RNA.328-201ENST00000365208 113 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNU6-364P-201ENST00000384387 107 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNU1-119P-201ENST00000391122 165 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 SNORD100-201ENST00000408573 76 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNU2-51P-201ENST00000410708 197 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 AC022709.1-201ENST00000615967 87 ntBASIC0.71□□□□□ -2.3
UPF2Q9HAU5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
UPF2Q9HAU5 Y_RNA.35-201ENST00000362601 101 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UPF2Q9HAU5 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 RNU6-291P-201ENST00000384720 107 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 RNU6-1154P-201ENST00000391001 104 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 RNU6-447P-201ENST00000410293 104 ntBASIC0.7□□□□□ -2.3
UPF2Q9HAU5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 261 ms