Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORD114-5-201ENST00000362928 70 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 SNORA25.7-201ENST00000364375 127 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNY1P2-201ENST00000364820 117 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNU6-893P-201ENST00000458841 100 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNU6-848P-201ENST00000515948 107 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNU6-617P-201ENST00000516147 107 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNU6-473P-201ENST00000516164 107 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 DEFB131E-201ENST00000532329 154 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 RNU4-58P-201ENST00000363192 141 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 SNORD115-24-201ENST00000363528 82 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 RNU4-70P-201ENST00000384579 139 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 MIR145-201ENST00000384967 88 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 AC244505.6-201ENST00000452829 130 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 MIR3149-201ENST00000584629 83 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 SNORA70.25-201ENST00000612741 95 ntBASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.05□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 SNORD114-15-201ENST00000364687 72 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6-47P-201ENST00000383866 107 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 MIR548H3-201ENST00000408771 118 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 MIR3128-201ENST00000581957 66 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6-161P-201ENST00000363051 106 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 SNORD114-31-201ENST00000363219 75 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 SNORD114-10-201ENST00000363409 72 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNA5SP403-201ENST00000363598 108 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 MIR593-201ENST00000384856 100 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 MTCYBP9-201ENST00000431021 303 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6-240P-201ENST00000516098 97 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU7-129P-201ENST00000516128 62 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 RNU6-111P-201ENST00000517179 105 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 AL162376.1-201ENST00000624117 175 ntBASIC-0.06□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 RNU6-690P-201ENST00000365242 106 ntBASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 MIR501-201ENST00000390204 84 ntBASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 RNU6-782P-201ENST00000516852 104 ntBASIC-0.07□□□□□ -2.42
RPAP1Q9BWH6 MIR101-2-201ENST00000362195 79 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 RNU6-429P-201ENST00000384582 108 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 RNU6-269P-201ENST00000391077 97 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 RNU6-588P-201ENST00000410281 105 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 TRAJ51-201ENST00000504127 63 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 RNU7-123P-201ENST00000515911 60 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 AC022559.1-201ENST00000520905 205 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 AC138869.1-201ENST00000568623 124 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 MIR3925-201ENST00000584674 77 ntBASIC-0.08□□□□□ -2.42
RPAP1Q9BWH6 RNU6-309P-201ENST00000364573 106 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 SNORD41.1-201ENST00000391000 69 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 AC141557.1-201ENST00000540982 400 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 MIR548AD-201ENST00000584780 82 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 uc_338.28-201ENST00000612082 187 ntBASIC-0.09□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 RNA5SP368-201ENST00000364298 116 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 MIR206-201ENST00000384872 86 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 RNU4-69P-201ENST00000410677 143 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 RNU7-164P-201ENST00000459221 62 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 RNU7-104P-201ENST00000459398 79 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 MIR4500-201ENST00000579472 76 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 MIR4493-201ENST00000584016 73 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 AC009779.6-201ENST00000603972 165 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 AC021443.1-201ENST00000604478 211 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 AC098479.1-201ENST00000609225 154 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 AC062037.2-201ENST00000610137 73 ntBASIC-0.1□□□□□ -2.43
RPAP1Q9BWH6 SNORA63-201ENST00000363450 132 ntBASIC-0.11□□□□□ -2.43
RPAP1Q9BWH6 RNU6-818P-201ENST00000364837 108 ntBASIC-0.11□□□□□ -2.43
RPAP1Q9BWH6 RNU6-449P-201ENST00000383914 107 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms