Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 RNU7-2P-201ENST00000516096 62 ntBASIC1.29□□□□□ -2.2
ATRIPQ8WXE1 SNORA70.22-201ENST00000517160 124 ntBASIC1.29□□□□□ -2.2
ATRIPQ8WXE1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.29□□□□□ -2.2
ATRIPQ8WXE1 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
ATRIPQ8WXE1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ATRIPQ8WXE1 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 Y_RNA.374-201ENST00000365606 101 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 RNU6-147P-201ENST00000383983 107 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 Y_RNA.448-201ENST00000384185 108 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 Y_RNA.507-201ENST00000384500 99 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 RNU6-679P-201ENST00000391003 106 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 MIR1912-201ENST00000410389 80 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 MTATP6P29-201ENST00000415057 132 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 AC015818.7-201ENST00000428754 109 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 AC087499.7-201ENST00000441958 109 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 RNU6-94P-201ENST00000607728 107 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.28□□□□□ -2.2
ATRIPQ8WXE1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 RNU6-949P-201ENST00000384040 107 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 RNU6-409P-201ENST00000384114 104 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 RNU6-1321P-201ENST00000390905 107 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 SNORD83.1-201ENST00000411362 77 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
ATRIPQ8WXE1 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
ATRIPQ8WXE1 SNORD115-35-201ENST00000365122 82 ntBASIC1.26□□□□□ -2.21
ATRIPQ8WXE1 Y_RNA.360-201ENST00000365512 102 ntBASIC1.26□□□□□ -2.21
ATRIPQ8WXE1 U8.15-201ENST00000390947 134 ntBASIC1.26□□□□□ -2.21
ATRIPQ8WXE1 RNU6-733P-201ENST00000410759 104 ntBASIC1.26□□□□□ -2.21
ATRIPQ8WXE1 AC141557.1-201ENST00000540982 400 ntBASIC1.26□□□□□ -2.21
ATRIPQ8WXE1 SNORD114-10-201ENST00000363409 72 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 SNORD113.3-201ENST00000364630 78 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 AC096949.1-201ENST00000412047 152 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 AL031737.1-201ENST00000450125 223 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 RNU7-90P-201ENST00000459216 62 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 AC012676.2-201ENST00000619258 186 ntBASIC1.25□□□□□ -2.21
ATRIPQ8WXE1 SNORA51.5-201ENST00000384126 131 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 MIR577-201ENST00000385196 96 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 MIR1302-5-201ENST00000408164 150 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 AC002429.1-201ENST00000437672 148 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 MIR3613-201ENST00000579844 87 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATRIPQ8WXE1 RNU6-756P-201ENST00000383997 107 ntBASIC1.23□□□□□ -2.21
ATRIPQ8WXE1 MIR34C-201ENST00000384831 77 ntBASIC1.23□□□□□ -2.21
ATRIPQ8WXE1 MT-TF-201ENST00000387314 71 ntBASIC1.23□□□□□ -2.21
ATRIPQ8WXE1 UBL5P1-201ENST00000507979 193 ntBASIC1.23□□□□□ -2.21
ATRIPQ8WXE1 MIR376B-201ENST00000614515 100 ntBASIC1.23□□□□□ -2.21
ATRIPQ8WXE1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 Y_RNA.247-201ENST00000364500 92 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 RNU6-865P-201ENST00000364772 107 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 Y_RNA.328-201ENST00000365208 113 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 MIR590-201ENST00000385008 97 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 RNU7-48P-201ENST00000458875 63 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 AL512310.12-203ENST00000640543 90 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 AC023934.1-201ENST00000574529 2389 ntBASIC1.22□□□□□ -2.21
ATRIPQ8WXE1 RNU6-1313P-201ENST00000362622 102 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 RNU6-1099P-201ENST00000363533 107 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 RNU6-934P-201ENST00000365154 107 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 RNU6-1201P-201ENST00000384227 107 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 RNY1P4-201ENST00000384595 115 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 SNORD111-201ENST00000408139 94 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 MIR4771-2-201ENST00000577758 74 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 MIR4694-201ENST00000578534 80 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 MIR4771-1-201ENST00000582617 74 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 U6.109-201ENST00000636749 87 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
ATRIPQ8WXE1 RNU6-766P-201ENST00000362478 107 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 RNY3P2-201ENST00000362918 102 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 SNORD93-201ENST00000408813 74 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 MIR18B-201ENST00000454574 71 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 RNU6-109P-201ENST00000516364 107 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 RNU6-184P-201ENST00000516514 107 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 AC138749.4-201ENST00000563970 127 ntBASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
ATRIPQ8WXE1 RNU6-832P-201ENST00000363319 107 ntBASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 RNU1-36P-201ENST00000365130 165 ntBASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 MIR216A-201ENST00000385063 110 ntBASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 RNU7-185P-201ENST00000459215 60 ntBASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
ATRIPQ8WXE1 RNA5SP436-201ENST00000516020 115 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms