Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNU6-409P-201ENST00000384114 104 ntBASIC1.38□□□□□ -2.19
DDX53Q86TM3 MIR5009-201ENST00000578736 100 ntBASIC1.38□□□□□ -2.19
DDX53Q86TM3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
DDX53Q86TM3 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 MIR605-201ENST00000385078 83 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 MIR1257-201ENST00000408490 117 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 AC096949.1-201ENST00000412047 152 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 RPS26P5-201ENST00000418544 335 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 AC133485.1-201ENST00000567176 124 ntBASIC1.37□□□□□ -2.19
DDX53Q86TM3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
DDX53Q86TM3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
DDX53Q86TM3 SNORA63.4-201ENST00000362763 126 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 RNU1-36P-201ENST00000365130 165 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 RNU6-679P-201ENST00000391003 106 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 RNU6-733P-201ENST00000410759 104 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 RPS29P28-201ENST00000446439 141 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 AC020891.4-201ENST00000605745 93 ntBASIC1.36□□□□□ -2.19
DDX53Q86TM3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
DDX53Q86TM3 RNU6-865P-201ENST00000364772 107 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 MIR598-201ENST00000384868 97 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-447P-201ENST00000410293 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-355P-201ENST00000410427 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-791P-201ENST00000410467 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-705P-201ENST00000410601 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-860P-201ENST00000410860 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU6-785P-201ENST00000411324 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 AL353813.1-201ENST00000440700 253 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 AC067940.1-201ENST00000458411 300 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNU7-48P-201ENST00000458875 63 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 uc_338.28-201ENST00000612082 187 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 U6.90-201ENST00000614007 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 U6.70-201ENST00000620287 104 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 U6.109-201ENST00000636749 87 ntBASIC1.35□□□□□ -2.19
DDX53Q86TM3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
DDX53Q86TM3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
DDX53Q86TM3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.34□□□□□ -2.19
DDX53Q86TM3 MIR100-201ENST00000385259 80 ntBASIC1.34□□□□□ -2.19
DDX53Q86TM3 SNORD124-201ENST00000459577 104 ntBASIC1.34□□□□□ -2.19
DDX53Q86TM3 AL512310.12-203ENST00000640543 90 ntBASIC1.34□□□□□ -2.19
DDX53Q86TM3 MIR1-1-201ENST00000362147 71 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNU6-369P-201ENST00000362515 102 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNU6-403P-201ENST00000363163 104 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNA5SP133-201ENST00000363368 119 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNU1-93P-201ENST00000364704 169 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 Y_RNA.374-201ENST00000365606 101 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 MIR34C-201ENST00000384831 77 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNU4-83P-201ENST00000410863 133 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 AC138749.4-201ENST00000563970 127 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 MIR4491-201ENST00000581087 68 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 MIR4676-201ENST00000583078 72 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 MIR376B-201ENST00000614515 100 ntBASIC1.33□□□□□ -2.2
DDX53Q86TM3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.32□□□□□ -2.2
DDX53Q86TM3 RNU6-106P-201ENST00000384405 107 ntBASIC1.32□□□□□ -2.2
DDX53Q86TM3 MIR125B2-201ENST00000385128 89 ntBASIC1.32□□□□□ -2.2
DDX53Q86TM3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
DDX53Q86TM3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.32□□□□□ -2.2
DDX53Q86TM3 RNU6-554P-201ENST00000410466 106 ntBASIC1.32□□□□□ -2.2
DDX53Q86TM3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.32□□□□□ -2.2
DDX53Q86TM3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 RNY1P2-201ENST00000364820 117 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
DDX53Q86TM3 SNORA72.6-201ENST00000384520 129 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 MIR520E-201ENST00000384867 87 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 MIR942-201ENST00000401111 86 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.31□□□□□ -2.2
DDX53Q86TM3 RPS29P1-201ENST00000465274 159 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 UBL5P1-201ENST00000507979 193 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 RNU6-977P-201ENST00000516411 103 ntBASIC1.31□□□□□ -2.2
DDX53Q86TM3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 Y_RNA.81-201ENST00000362997 102 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 RNU6-755P-201ENST00000364400 103 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 MIR1302-5-201ENST00000408164 150 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 MIR1827-201ENST00000408549 66 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 PDCD5P2-201ENST00000507570 312 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 SNORA25.16-201ENST00000516741 121 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 DEFB131E-201ENST00000532329 154 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 AP001362.1-201ENST00000625165 124 ntBASIC1.3□□□□□ -2.2
DDX53Q86TM3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.29□□□□□ -2.2
DDX53Q86TM3 MIR200A-201ENST00000384875 90 ntBASIC1.29□□□□□ -2.2
DDX53Q86TM3 MIR577-201ENST00000385196 96 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms