Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 MIR548Z-201ENST00000584743 97 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
KRT40Q6A162 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRT40Q6A162 MIR377-201ENST00000362145 69 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 SNORD114-10-201ENST00000363409 72 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 MIR488-201ENST00000365739 83 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 RNU6-949P-201ENST00000384040 107 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 MIR758-201ENST00000390227 88 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 MIR376B-201ENST00000614515 100 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 AC012531.4-201ENST00000616509 177 ntBASIC1.53□□□□□ -2.16
KRT40Q6A162 RNU6-1255P-201ENST00000363434 112 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU6-580P-201ENST00000365159 107 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU6-1165P-201ENST00000410119 107 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNA5SP237-201ENST00000410414 113 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 Y_RNA.601-201ENST00000410500 113 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 MTATP8P2-201ENST00000435212 202 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU7-62P-201ENST00000458856 62 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 AC004223.1-201ENST00000479840 271 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 SCARNA23-201ENST00000516060 130 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU6-795P-201ENST00000516323 103 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 Y_RNA.694-201ENST00000516677 117 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RN7SKP88-201ENST00000516847 250 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU6-158P-201ENST00000517104 100 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 MIR5582-201ENST00000579697 68 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 7SK.8-201ENST00000612110 250 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 AL442128.1-201ENST00000615151 90 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 7SK.11-201ENST00000615477 250 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 7SK.13-201ENST00000622040 250 ntBASIC1.52□□□□□ -2.17
KRT40Q6A162 RNU4-36P-201ENST00000364294 144 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 SNORA75.2-201ENST00000391138 150 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 SNORA75.3-201ENST00000391231 150 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 SNORA40.13-201ENST00000516379 120 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 RNU6-1223P-201ENST00000517124 104 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 AP000753.3-201ENST00000604083 169 ntBASIC1.51□□□□□ -2.17
KRT40Q6A162 RNU6-170P-201ENST00000362832 104 ntBASIC1.5□□□□□ -2.17
KRT40Q6A162 MIR548J-201ENST00000408833 112 ntBASIC1.5□□□□□ -2.17
KRT40Q6A162 snoU13.21-201ENST00000459368 105 ntBASIC1.5□□□□□ -2.17
KRT40Q6A162 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.5□□□□□ -2.17
KRT40Q6A162 MIR4777-201ENST00000583710 86 ntBASIC1.5□□□□□ -2.17
KRT40Q6A162 MIR6767-201ENST00000637302 66 ntBASIC1.5□□□□□ -2.17
KRT40Q6A162 AL512310.12-203ENST00000640543 90 ntBASIC1.5□□□□□ -2.17
KRT40Q6A162 Y_RNA.93-201ENST00000363066 109 ntBASIC1.49□□□□□ -2.17
KRT40Q6A162 Y_RNA.107-201ENST00000363190 121 ntBASIC1.49□□□□□ -2.17
KRT40Q6A162 RNU6-49P-201ENST00000384256 107 ntBASIC1.49□□□□□ -2.17
KRT40Q6A162 U8.15-201ENST00000390947 134 ntBASIC1.49□□□□□ -2.17
KRT40Q6A162 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.49□□□□□ -2.17
KRT40Q6A162 MRPL35P3-201ENST00000421557 364 ntBASIC1.49□□□□□ -2.17
KRT40Q6A162 SEPT14P17-201ENST00000617978 177 ntBASIC1.49□□□□□ -2.17
KRT40Q6A162 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.49□□□□□ -2.17
KRT40Q6A162 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KRT40Q6A162 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.48□□□□□ -2.17
KRT40Q6A162 RNY4P30-201ENST00000410216 95 ntBASIC1.48□□□□□ -2.17
KRT40Q6A162 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
KRT40Q6A162 RNU7-48P-201ENST00000458875 63 ntBASIC1.48□□□□□ -2.17
KRT40Q6A162 MIR3660-201ENST00000584845 100 ntBASIC1.48□□□□□ -2.17
KRT40Q6A162 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.48□□□□□ -2.17
KRT40Q6A162 Y_RNA.168-201ENST00000363740 102 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 RNU6-1131P-201ENST00000364955 107 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 Y_RNA.342-201ENST00000365352 113 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 AC004941.2-201ENST00000427009 228 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 MIR151B-201ENST00000584249 96 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 MIR6788-201ENST00000618842 66 ntBASIC1.47□□□□□ -2.17
KRT40Q6A162 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.47□□□□□ -2.17
KRT40Q6A162 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.47□□□□□ -2.17
KRT40Q6A162 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
KRT40Q6A162 Y_RNA.10-201ENST00000362371 110 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 Y_RNA.95-201ENST00000363079 95 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-865P-201ENST00000364772 107 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 Y_RNA.467-201ENST00000384297 102 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-447P-201ENST00000410293 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-1118P-201ENST00000410382 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-1076P-201ENST00000410397 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-355P-201ENST00000410427 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-791P-201ENST00000410467 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-705P-201ENST00000410601 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-1100P-201ENST00000410691 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-860P-201ENST00000410860 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-1217P-201ENST00000411276 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU6-785P-201ENST00000411324 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 RNU7-61P-201ENST00000515897 61 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 AC138749.4-201ENST00000563970 127 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 U6.90-201ENST00000614007 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 U6.70-201ENST00000620287 104 ntBASIC1.46□□□□□ -2.18
KRT40Q6A162 Y_RNA.369-201ENST00000365568 117 ntBASIC1.45□□□□□ -2.18
KRT40Q6A162 RNY1P7-201ENST00000384743 110 ntBASIC1.45□□□□□ -2.18
KRT40Q6A162 RNU6-644P-201ENST00000391155 98 ntBASIC1.45□□□□□ -2.18
KRT40Q6A162 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.45□□□□□ -2.18
KRT40Q6A162 Y_RNA.659-201ENST00000515994 113 ntBASIC1.45□□□□□ -2.18
KRT40Q6A162 MIR4679-1-201ENST00000637619 75 ntBASIC1.45□□□□□ -2.18
KRT40Q6A162 Y_RNA.98-201ENST00000363109 102 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms