Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6-106P-201ENST00000384405 107 ntBASIC1.12□□□□□ -2.23
COPB1P53618 RPS26P5-201ENST00000418544 335 ntBASIC1.12□□□□□ -2.23
COPB1P53618 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
COPB1P53618 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
COPB1P53618 RNU6-1223P-201ENST00000517124 104 ntBASIC1.12□□□□□ -2.23
COPB1P53618 MIR151B-201ENST00000584249 96 ntBASIC1.12□□□□□ -2.23
COPB1P53618 AC020891.4-201ENST00000605745 93 ntBASIC1.12□□□□□ -2.23
COPB1P53618 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
COPB1P53618 MIR6515-201ENST00000619843 57 ntBASIC1.12□□□□□ -2.23
COPB1P53618 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COPB1P53618 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU1-36P-201ENST00000365130 165 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-409P-201ENST00000384114 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 Y_RNA.448-201ENST00000384185 108 ntBASIC1.11□□□□□ -2.23
COPB1P53618 Y_RNA.507-201ENST00000384500 99 ntBASIC1.11□□□□□ -2.23
COPB1P53618 MIR7-2-201ENST00000384970 110 ntBASIC1.11□□□□□ -2.23
COPB1P53618 MIR605-201ENST00000385078 83 ntBASIC1.11□□□□□ -2.23
COPB1P53618 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
COPB1P53618 Y_RNA.588-201ENST00000391254 102 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-447P-201ENST00000410293 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-1118P-201ENST00000410382 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-1076P-201ENST00000410397 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-355P-201ENST00000410427 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-791P-201ENST00000410467 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-705P-201ENST00000410601 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 SNORA7.5-201ENST00000410672 110 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-1100P-201ENST00000410691 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-860P-201ENST00000410860 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-1217P-201ENST00000411276 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU6-785P-201ENST00000411324 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RPL39P25-201ENST00000449384 154 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNU7-185P-201ENST00000459215 60 ntBASIC1.11□□□□□ -2.23
COPB1P53618 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
COPB1P53618 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
COPB1P53618 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.11□□□□□ -2.23
COPB1P53618 U6.90-201ENST00000614007 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 U6.70-201ENST00000620287 104 ntBASIC1.11□□□□□ -2.23
COPB1P53618 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
COPB1P53618 Y_RNA.81-201ENST00000362997 102 ntBASIC1.1□□□□□ -2.23
COPB1P53618 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
COPB1P53618 RNU1-93P-201ENST00000364704 169 ntBASIC1.1□□□□□ -2.23
COPB1P53618 Y_RNA.328-201ENST00000365208 113 ntBASIC1.1□□□□□ -2.23
COPB1P53618 RNU6-733P-201ENST00000410759 104 ntBASIC1.1□□□□□ -2.23
COPB1P53618 AC015818.7-201ENST00000428754 109 ntBASIC1.1□□□□□ -2.23
COPB1P53618 AC087499.7-201ENST00000441958 109 ntBASIC1.1□□□□□ -2.23
COPB1P53618 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
COPB1P53618 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
COPB1P53618 RNU6-1018P-201ENST00000516577 106 ntBASIC1.1□□□□□ -2.23
COPB1P53618 AC023934.1-201ENST00000574529 2389 ntBASIC1.1□□□□□ -2.23
COPB1P53618 RNU6-1313P-201ENST00000362622 102 ntBASIC1.09□□□□□ -2.23
COPB1P53618 Y_RNA.155-201ENST00000363632 101 ntBASIC1.09□□□□□ -2.23
COPB1P53618 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
COPB1P53618 RNY1P2-201ENST00000364820 117 ntBASIC1.09□□□□□ -2.23
COPB1P53618 Y_RNA.360-201ENST00000365512 102 ntBASIC1.09□□□□□ -2.23
COPB1P53618 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
COPB1P53618 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.09□□□□□ -2.23
COPB1P53618 RNU6-554P-201ENST00000410466 106 ntBASIC1.09□□□□□ -2.23
COPB1P53618 RNU7-48P-201ENST00000458875 63 ntBASIC1.09□□□□□ -2.23
COPB1P53618 RNA5SP480-201ENST00000516840 109 ntBASIC1.09□□□□□ -2.23
COPB1P53618 AC138749.4-201ENST00000563970 127 ntBASIC1.09□□□□□ -2.23
COPB1P53618 MIR4771-2-201ENST00000577758 74 ntBASIC1.09□□□□□ -2.23
COPB1P53618 MIR4491-201ENST00000581087 68 ntBASIC1.09□□□□□ -2.23
COPB1P53618 MIR4771-1-201ENST00000582617 74 ntBASIC1.09□□□□□ -2.23
COPB1P53618 MIR376B-201ENST00000614515 100 ntBASIC1.09□□□□□ -2.23
COPB1P53618 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COPB1P53618 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COPB1P53618 SNORA63.4-201ENST00000362763 126 ntBASIC1.08□□□□□ -2.24
COPB1P53618 Y_RNA.98-201ENST00000363109 102 ntBASIC1.08□□□□□ -2.24
COPB1P53618 MIR34C-201ENST00000384831 77 ntBASIC1.08□□□□□ -2.24
COPB1P53618 MIR125B2-201ENST00000385128 89 ntBASIC1.08□□□□□ -2.24
COPB1P53618 SNORD93-201ENST00000408813 74 ntBASIC1.08□□□□□ -2.24
COPB1P53618 PDCD5P2-201ENST00000507570 312 ntBASIC1.08□□□□□ -2.24
COPB1P53618 RNU6-1006P-201ENST00000516998 103 ntBASIC1.08□□□□□ -2.24
COPB1P53618 MIR4676-201ENST00000583078 72 ntBASIC1.08□□□□□ -2.24
COPB1P53618 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
COPB1P53618 AC022709.1-201ENST00000615967 87 ntBASIC1.08□□□□□ -2.24
COPB1P53618 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
COPB1P53618 RNU6-1099P-201ENST00000363533 107 ntBASIC1.07□□□□□ -2.24
COPB1P53618 Y_RNA.163-201ENST00000363702 113 ntBASIC1.07□□□□□ -2.24
COPB1P53618 MIR577-201ENST00000385196 96 ntBASIC1.07□□□□□ -2.24
COPB1P53618 MIR1827-201ENST00000408549 66 ntBASIC1.07□□□□□ -2.24
COPB1P53618 RNU6-994P-201ENST00000410507 111 ntBASIC1.07□□□□□ -2.24
COPB1P53618 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
COPB1P53618 AC133485.1-201ENST00000567176 124 ntBASIC1.07□□□□□ -2.24
COPB1P53618 MIR4694-201ENST00000578534 80 ntBASIC1.07□□□□□ -2.24
COPB1P53618 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
COPB1P53618 Y_RNA.377-201ENST00000365644 108 ntBASIC1.06□□□□□ -2.24
COPB1P53618 RNU6-1201P-201ENST00000384227 107 ntBASIC1.06□□□□□ -2.24
COPB1P53618 MIR1257-201ENST00000408490 117 ntBASIC1.06□□□□□ -2.24
COPB1P53618 MIR3613-201ENST00000579844 87 ntBASIC1.06□□□□□ -2.24
COPB1P53618 MIR8066-201ENST00000617280 78 ntBASIC1.06□□□□□ -2.24
COPB1P53618 RNY3P2-201ENST00000362918 102 ntBASIC1.05□□□□□ -2.24
COPB1P53618 Y_RNA.78-201ENST00000362970 110 ntBASIC1.05□□□□□ -2.24
COPB1P53618 RNA5SP133-201ENST00000363368 119 ntBASIC1.05□□□□□ -2.24
COPB1P53618 RNU6-865P-201ENST00000364772 107 ntBASIC1.05□□□□□ -2.24
COPB1P53618 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
COPB1P53618 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
COPB1P53618 MIR4804-201ENST00000581683 73 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 262.6 ms