Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TRAJ51-201ENST00000504127 63 ntBASIC2.28□□□□□ -2.04
RNF144AP50876 AC015688.6-201ENST00000577737 104 ntBASIC2.28□□□□□ -2.04
RNF144AP50876 RNU7-10P-201ENST00000607194 63 ntBASIC2.28□□□□□ -2.04
RNF144AP50876 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
RNF144AP50876 AL596028.1-201ENST00000326971 197 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 RNU6-1051P-201ENST00000365471 102 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 SNORA8.1-201ENST00000384250 140 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RNF144AP50876 AC055731.1-201ENST00000474387 401 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 AP003716.2-201ENST00000528260 108 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 MIR548H5-201ENST00000580314 60 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 AC013244.2-201ENST00000603396 103 ntBASIC2.27□□□□□ -2.05
RNF144AP50876 RNA5SP264-201ENST00000363115 107 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 RNA5SP68-201ENST00000363885 119 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 Y_RNA.239-201ENST00000364444 113 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 MIR154-201ENST00000385243 84 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 U8.13-201ENST00000390842 128 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 RNU2-59P-201ENST00000410482 191 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 Y_RNA.809-201ENST00000516058 95 ntBASIC2.26□□□□□ -2.05
RNF144AP50876 RNU6-580P-201ENST00000365159 107 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 RNY4P3-201ENST00000365254 95 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 SNORA11.2-201ENST00000408318 127 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 SNORA77B-201ENST00000578179 125 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 AL137847.3-201ENST00000611521 109 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 TRDV1-202ENST00000621643 102 ntBASIC2.25□□□□□ -2.05
RNF144AP50876 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF144AP50876 AC023934.1-201ENST00000574529 2389 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 RNA5SP456-201ENST00000364002 114 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 Y_RNA.207-201ENST00000364142 106 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 Y_RNA.371-201ENST00000365591 113 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 RNU6-1241P-201ENST00000384536 107 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 RNU6-540P-201ENST00000384622 101 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 MIR27B-201ENST00000385129 97 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RNF144AP50876 MIR1265-201ENST00000408444 86 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.24□□□□□ -2.05
RNF144AP50876 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF144AP50876 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RNF144AP50876 Y_RNA.42-201ENST00000362660 108 ntBASIC2.23□□□□□ -2.05
RNF144AP50876 Y_RNA.56-201ENST00000362798 112 ntBASIC2.23□□□□□ -2.05
RNF144AP50876 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RNF144AP50876 RPS27P16-201ENST00000425758 201 ntBASIC2.23□□□□□ -2.05
RNF144AP50876 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
RNF144AP50876 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.23□□□□□ -2.05
RNF144AP50876 ZNF209P-201ENST00000593450 2304 ntBASIC2.23□□□□□ -2.05
RNF144AP50876 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RNF144AP50876 Y_RNA.36-201ENST00000362602 112 ntBASIC2.22□□□□□ -2.05
RNF144AP50876 MIR519A1-201ENST00000385257 85 ntBASIC2.22□□□□□ -2.05
RNF144AP50876 AL606490.4-201ENST00000423117 127 ntBASIC2.22□□□□□ -2.05
RNF144AP50876 RNU7-185P-201ENST00000459215 60 ntBASIC2.22□□□□□ -2.05
RNF144AP50876 AC046143.2-201ENST00000609789 160 ntBASIC2.22□□□□□ -2.05
RNF144AP50876 MIR8074-201ENST00000615081 81 ntBASIC2.22□□□□□ -2.05
RNF144AP50876 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF144AP50876 RNA5SP289-201ENST00000362332 137 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 RNU6-664P-201ENST00000362381 107 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 Y_RNA.13-201ENST00000362403 112 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 RNU6-1260P-201ENST00000362944 107 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 RNU6-330P-201ENST00000363015 107 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 Y_RNA.386-201ENST00000383913 105 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 AC092628.1-201ENST00000436250 252 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 AL513328.1-201ENST00000446460 224 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 MIR514B-201ENST00000516774 80 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF144AP50876 AL773524.1-201ENST00000614065 229 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 MIR8063-201ENST00000621930 81 ntBASIC2.21□□□□□ -2.06
RNF144AP50876 RNU6-340P-201ENST00000364005 107 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 SNORD101-201ENST00000384027 73 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 RNU6-800P-201ENST00000384473 103 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 MIR1257-201ENST00000408490 117 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF144AP50876 MIR6082-201ENST00000613604 109 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 U6.111-201ENST00000636093 83 ntBASIC2.2□□□□□ -2.06
RNF144AP50876 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RNF144AP50876 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RNF144AP50876 RNU6-154P-201ENST00000384306 106 ntBASIC2.19□□□□□ -2.06
RNF144AP50876 RNU6-663P-201ENST00000391105 106 ntBASIC2.19□□□□□ -2.06
RNF144AP50876 MIR942-201ENST00000401111 86 ntBASIC2.19□□□□□ -2.06
RNF144AP50876 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
RNF144AP50876 Y_RNA.697-201ENST00000516776 113 ntBASIC2.19□□□□□ -2.06
RNF144AP50876 MIR4696-201ENST00000581431 70 ntBASIC2.19□□□□□ -2.06
RNF144AP50876 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RNF144AP50876 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF144AP50876 MIR449A-201ENST00000362113 91 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 RNU6-681P-201ENST00000364012 104 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 Y_RNA.205-201ENST00000364128 113 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 SNORD115-31-201ENST00000365318 82 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 RNU6-291P-201ENST00000384720 107 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 AL359511.1-201ENST00000402970 211 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 RNU6-1054P-201ENST00000411293 104 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 snoU13.21-201ENST00000459368 105 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 RPL23AP94-201ENST00000512518 302 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 MIR3140-201ENST00000583685 90 ntBASIC2.18□□□□□ -2.06
RNF144AP50876 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 242.7 ms