Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU7-161P-201ENST00000517289 62 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 MIR3149-201ENST00000584629 83 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 MIR501-201ENST00000390204 84 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 RNU6-918P-201ENST00000391219 106 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 MTCYBP9-201ENST00000431021 303 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 RNU6-782P-201ENST00000516852 104 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 AC011603.4-201ENST00000611325 277 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 AC105081.1-201ENST00000617727 106 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
SHMT2P34897 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 RNU6-929P-201ENST00000384429 107 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 RNU4-71P-201ENST00000516258 113 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SHMT2P34897 AC138869.1-201ENST00000568623 124 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 MIR4743-201ENST00000584576 69 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 SNORA70.25-201ENST00000612741 95 ntBASIC-0.13□□□□□ -2.43
SHMT2P34897 RNA5SP403-201ENST00000363598 108 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 RNU6-818P-201ENST00000364837 108 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 RNU7-104P-201ENST00000459398 79 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 RNU6-240P-201ENST00000516098 97 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 RNU2-60P-201ENST00000517290 128 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 MIR548H5-201ENST00000580314 60 ntBASIC-0.14□□□□□ -2.43
SHMT2P34897 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 RNU6-429P-201ENST00000384582 108 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 MIR568-201ENST00000385036 95 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 MIR548L-201ENST00000408303 86 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 AC107027.2-201ENST00000512197 115 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 AC138907.4-201ENST00000570107 226 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 MIR3128-201ENST00000581957 66 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 MIR3925-201ENST00000584674 77 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 AC021443.1-201ENST00000604478 211 ntBASIC-0.15□□□□□ -2.43
SHMT2P34897 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.16□□□□□ -2.44
SHMT2P34897 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
SHMT2P34897 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
SHMT2P34897 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.16□□□□□ -2.44
SHMT2P34897 SNORA75.5-201ENST00000391291 81 ntBASIC-0.16□□□□□ -2.44
SHMT2P34897 RNU7-123P-201ENST00000515911 60 ntBASIC-0.16□□□□□ -2.44
SHMT2P34897 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 SNORD41.1-201ENST00000391000 69 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 MIR892B-201ENST00000401279 77 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 RNU7-165P-201ENST00000458864 60 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 RNU7-164P-201ENST00000459221 62 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 MIR5706-201ENST00000579841 80 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 MIR548AD-201ENST00000584780 82 ntBASIC-0.17□□□□□ -2.44
SHMT2P34897 RNU6-47P-201ENST00000383866 107 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 MIR206-201ENST00000384872 86 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 RNU4-69P-201ENST00000410677 143 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 MTATP6P21-201ENST00000440681 189 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 TRAJ51-201ENST00000504127 63 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 RNU6-111P-201ENST00000517179 105 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 RNU7-10P-201ENST00000607194 63 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 uc_338.28-201ENST00000612082 187 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 AC067863.3-201ENST00000624172 122 ntBASIC-0.18□□□□□ -2.44
SHMT2P34897 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 RNU6-449P-201ENST00000383914 107 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 RNU6-269P-201ENST00000391077 97 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 AC097635.1-201ENST00000450678 155 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 RNU7-48P-201ENST00000458875 63 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 RNU6-180P-201ENST00000516697 61 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 AC062037.2-201ENST00000610137 73 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 AC073869.9-201ENST00000641610 120 ntBASIC-0.19□□□□□ -2.44
SHMT2P34897 RNU6-312P-201ENST00000364629 107 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 RNU6-652P-201ENST00000365488 107 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 MIR599-201ENST00000385069 95 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 MIR1302-3-201ENST00000408128 138 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 RNU7-159P-201ENST00000459284 62 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 MIR4677-201ENST00000584153 80 ntBASIC-0.2□□□□□ -2.44
SHMT2P34897 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.21□□□□□ -2.44
SHMT2P34897 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.21□□□□□ -2.44
SHMT2P34897 U7.6-201ENST00000610841 64 ntBASIC-0.21□□□□□ -2.44
SHMT2P34897 RNU6-508P-201ENST00000363231 103 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 RNY1P11-201ENST00000363759 113 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 RNU6V-201ENST00000384105 107 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 MIR635-201ENST00000384830 98 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 RNU6-588P-201ENST00000410281 105 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 RNA5SP163-201ENST00000410304 99 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 HMGN2P22-201ENST00000427588 175 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 MIR3646-201ENST00000578301 84 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 MIR4500-201ENST00000579472 76 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 AL670379.3-201ENST00000605040 251 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 MIR6844-201ENST00000637122 62 ntBASIC-0.22□□□□□ -2.44
SHMT2P34897 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms