Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU6-765P-201ENST00000516916 99 ntBASIC1.36□□□□□ -2.19
ATF4P18848 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.36□□□□□ -2.19
ATF4P18848 AC141557.1-201ENST00000540982 400 ntBASIC1.36□□□□□ -2.19
ATF4P18848 MIR4500-201ENST00000579472 76 ntBASIC1.36□□□□□ -2.19
ATF4P18848 AL442128.1-201ENST00000615151 90 ntBASIC1.36□□□□□ -2.19
ATF4P18848 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ATF4P18848 RNU6-1201P-201ENST00000384227 107 ntBASIC1.35□□□□□ -2.19
ATF4P18848 RNU7-56P-201ENST00000458744 62 ntBASIC1.35□□□□□ -2.19
ATF4P18848 RNU7-102P-201ENST00000458948 62 ntBASIC1.35□□□□□ -2.19
ATF4P18848 RNU6-832P-201ENST00000363319 107 ntBASIC1.34□□□□□ -2.19
ATF4P18848 SNORD38.1-201ENST00000363863 68 ntBASIC1.34□□□□□ -2.19
ATF4P18848 RNU6-755P-201ENST00000364400 103 ntBASIC1.34□□□□□ -2.19
ATF4P18848 Y_RNA.377-201ENST00000365644 108 ntBASIC1.34□□□□□ -2.19
ATF4P18848 RNU6-106P-201ENST00000384405 107 ntBASIC1.34□□□□□ -2.19
ATF4P18848 MIR577-201ENST00000385196 96 ntBASIC1.34□□□□□ -2.19
ATF4P18848 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.19
ATF4P18848 AL031737.1-201ENST00000450125 223 ntBASIC1.34□□□□□ -2.19
ATF4P18848 PDCD5P2-201ENST00000507570 312 ntBASIC1.34□□□□□ -2.19
ATF4P18848 RNU6-531P-201ENST00000516694 104 ntBASIC1.34□□□□□ -2.19
ATF4P18848 MTND5P40-201ENST00000559945 246 ntBASIC1.34□□□□□ -2.19
ATF4P18848 uc_338.28-201ENST00000612082 187 ntBASIC1.34□□□□□ -2.19
ATF4P18848 RMST_2.1-201ENST00000617263 136 ntBASIC1.34□□□□□ -2.19
ATF4P18848 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
ATF4P18848 MIR101-2-201ENST00000362195 79 ntBASIC1.33□□□□□ -2.2
ATF4P18848 AC003989.2-201ENST00000440224 169 ntBASIC1.33□□□□□ -2.2
ATF4P18848 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
ATF4P18848 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
ATF4P18848 AL359821.1-201ENST00000605519 182 ntBASIC1.33□□□□□ -2.2
ATF4P18848 Y_RNA.78-201ENST00000362970 110 ntBASIC1.32□□□□□ -2.2
ATF4P18848 RNU6-1099P-201ENST00000363533 107 ntBASIC1.32□□□□□ -2.2
ATF4P18848 RNA5SP99-201ENST00000364020 114 ntBASIC1.32□□□□□ -2.2
ATF4P18848 SNORA51.5-201ENST00000384126 131 ntBASIC1.32□□□□□ -2.2
ATF4P18848 SNORA40.18-201ENST00000391200 128 ntBASIC1.32□□□□□ -2.2
ATF4P18848 RNU6-554P-201ENST00000410466 106 ntBASIC1.32□□□□□ -2.2
ATF4P18848 AL353813.1-201ENST00000440700 253 ntBASIC1.32□□□□□ -2.2
ATF4P18848 AC023790.1-201ENST00000482174 347 ntBASIC1.32□□□□□ -2.2
ATF4P18848 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
ATF4P18848 AC090897.1-201ENST00000580909 226 ntBASIC1.32□□□□□ -2.2
ATF4P18848 MIR4661-201ENST00000582720 75 ntBASIC1.32□□□□□ -2.2
ATF4P18848 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
ATF4P18848 MIR8066-201ENST00000617280 78 ntBASIC1.32□□□□□ -2.2
ATF4P18848 Y_RNA.42-201ENST00000362660 108 ntBASIC1.31□□□□□ -2.2
ATF4P18848 RNU1-17P-201ENST00000363022 152 ntBASIC1.31□□□□□ -2.2
ATF4P18848 MIR520H-201ENST00000385126 88 ntBASIC1.31□□□□□ -2.2
ATF4P18848 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
ATF4P18848 RNU6-90P-201ENST00000606352 106 ntBASIC1.31□□□□□ -2.2
ATF4P18848 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.31□□□□□ -2.2
ATF4P18848 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ATF4P18848 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
ATF4P18848 SNORA63.4-201ENST00000362763 126 ntBASIC1.3□□□□□ -2.2
ATF4P18848 Y_RNA.81-201ENST00000362997 102 ntBASIC1.3□□□□□ -2.2
ATF4P18848 RNU6-756P-201ENST00000383997 107 ntBASIC1.3□□□□□ -2.2
ATF4P18848 SPINT5P-201ENST00000448174 155 ntBASIC1.3□□□□□ -2.2
ATF4P18848 SNORA25.15-201ENST00000516487 89 ntBASIC1.3□□□□□ -2.2
ATF4P18848 Y_RNA.697-201ENST00000516776 113 ntBASIC1.3□□□□□ -2.2
ATF4P18848 MIR4498-201ENST00000577599 66 ntBASIC1.3□□□□□ -2.2
ATF4P18848 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.3□□□□□ -2.2
ATF4P18848 AC013244.2-201ENST00000603396 103 ntBASIC1.3□□□□□ -2.2
ATF4P18848 MIR502-201ENST00000606349 86 ntBASIC1.3□□□□□ -2.2
ATF4P18848 AC084768.2-201ENST00000622736 221 ntBASIC1.3□□□□□ -2.2
ATF4P18848 HSBP1P2-201ENST00000299671 229 ntBASIC1.29□□□□□ -2.2
ATF4P18848 RNU1-42P-201ENST00000364033 160 ntBASIC1.29□□□□□ -2.2
ATF4P18848 MIR9-3-201ENST00000385084 90 ntBASIC1.29□□□□□ -2.2
ATF4P18848 Y_RNA.601-201ENST00000410500 113 ntBASIC1.29□□□□□ -2.2
ATF4P18848 Y_RNA.659-201ENST00000515994 113 ntBASIC1.29□□□□□ -2.2
ATF4P18848 AP003327.1-201ENST00000529684 127 ntBASIC1.29□□□□□ -2.2
ATF4P18848 RNU7-10P-201ENST00000607194 63 ntBASIC1.29□□□□□ -2.2
ATF4P18848 RNU6-766P-201ENST00000362478 107 ntBASIC1.28□□□□□ -2.2
ATF4P18848 SNORD45B-201ENST00000364617 72 ntBASIC1.28□□□□□ -2.2
ATF4P18848 RNA5SP190-201ENST00000365222 118 ntBASIC1.28□□□□□ -2.2
ATF4P18848 MIR548G-201ENST00000408442 89 ntBASIC1.28□□□□□ -2.2
ATF4P18848 RNU6-1006P-201ENST00000516998 103 ntBASIC1.28□□□□□ -2.2
ATF4P18848 RNU6-448P-201ENST00000517052 107 ntBASIC1.28□□□□□ -2.2
ATF4P18848 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
ATF4P18848 MIR548H5-201ENST00000580314 60 ntBASIC1.27□□□□□ -2.21
ATF4P18848 AC008608.1-201ENST00000603910 127 ntBASIC1.27□□□□□ -2.21
ATF4P18848 snoU13.31-201ENST00000607291 104 ntBASIC1.27□□□□□ -2.21
ATF4P18848 Y_RNA.676-201ENST00000516393 96 ntBASIC1.26□□□□□ -2.21
ATF4P18848 MIR8081-201ENST00000611533 95 ntBASIC1.26□□□□□ -2.21
ATF4P18848 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
ATF4P18848 Y_RNA.140-201ENST00000363474 103 ntBASIC1.25□□□□□ -2.21
ATF4P18848 RNU6-571P-201ENST00000384128 107 ntBASIC1.25□□□□□ -2.21
ATF4P18848 RNU6-904P-201ENST00000516206 101 ntBASIC1.25□□□□□ -2.21
ATF4P18848 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ATF4P18848 MIR378A-201ENST00000362177 66 ntBASIC1.24□□□□□ -2.21
ATF4P18848 Y_RNA.56-201ENST00000362798 112 ntBASIC1.24□□□□□ -2.21
ATF4P18848 Y_RNA.338-201ENST00000365320 114 ntBASIC1.24□□□□□ -2.21
ATF4P18848 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ATF4P18848 Y_RNA.536-201ENST00000384621 113 ntBASIC1.24□□□□□ -2.21
ATF4P18848 BX276092.1-201ENST00000427368 251 ntBASIC1.24□□□□□ -2.21
ATF4P18848 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.24□□□□□ -2.21
ATF4P18848 SCARNA23-201ENST00000516060 130 ntBASIC1.24□□□□□ -2.21
ATF4P18848 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
ATF4P18848 MIR4439-201ENST00000583746 80 ntBASIC1.24□□□□□ -2.21
ATF4P18848 Y_RNA.247-201ENST00000364500 92 ntBASIC1.23□□□□□ -2.21
ATF4P18848 RNA5SP117-201ENST00000365294 118 ntBASIC1.23□□□□□ -2.21
ATF4P18848 Y_RNA.544-201ENST00000384650 113 ntBASIC1.23□□□□□ -2.21
ATF4P18848 RNU6-535P-201ENST00000384722 107 ntBASIC1.23□□□□□ -2.21
ATF4P18848 MIR635-201ENST00000384830 98 ntBASIC1.23□□□□□ -2.21
ATF4P18848 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms