Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 MIR30D-201ENST00000362283 70 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 Y_RNA.4-201ENST00000362333 112 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 Y_RNA.164-201ENST00000363709 102 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 RNU6-979P-201ENST00000383896 107 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 RNU6-1124P-201ENST00000384169 107 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 MIR1185-1-201ENST00000408598 86 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 RNU6-638P-201ENST00000516582 104 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 RNU11-2P-201ENST00000516898 142 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 AP003716.2-201ENST00000528260 108 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 AL513043.2-201ENST00000573941 143 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 MIR4498-201ENST00000577599 66 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 AC020891.4-201ENST00000605745 93 ntBASIC1.65□□□□□ -2.15
ZNF28P17035 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ZNF28P17035 MIR377-201ENST00000362145 69 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 RNU6-228P-201ENST00000362700 106 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 RNA5SP264-201ENST00000363115 107 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 RNA5SP133-201ENST00000363368 119 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 SNORD1A-201ENST00000364968 72 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 RNU6-1065P-201ENST00000384513 106 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 MT-TF-201ENST00000387314 71 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 RNU6-613P-201ENST00000410412 108 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 RPL30P7-201ENST00000479312 323 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 MIR4500-201ENST00000579472 76 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 MIR3937-201ENST00000580135 106 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 AC025521.1-201ENST00000621624 286 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.64□□□□□ -2.15
ZNF28P17035 MIR378A-201ENST00000362177 66 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 Y_RNA.191-201ENST00000363972 113 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 RNU6-654P-201ENST00000364373 107 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ZNF28P17035 RNA5SP95-201ENST00000410319 137 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 Y_RNA.611-201ENST00000410682 108 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 uc_338.6-201ENST00000613544 171 ntBASIC1.63□□□□□ -2.15
ZNF28P17035 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
ZNF28P17035 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
ZNF28P17035 RNU6-509P-201ENST00000363519 107 ntBASIC1.62□□□□□ -2.15
ZNF28P17035 Y_RNA.426-201ENST00000384068 113 ntBASIC1.62□□□□□ -2.15
ZNF28P17035 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
ZNF28P17035 SNRPGP12-201ENST00000449481 213 ntBASIC1.62□□□□□ -2.15
ZNF28P17035 AC008834.1-201ENST00000511612 175 ntBASIC1.62□□□□□ -2.15
ZNF28P17035 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.62□□□□□ -2.15
ZNF28P17035 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
ZNF28P17035 AL161722.3-201ENST00000605789 2983 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 RNU6-633P-201ENST00000362612 103 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 Y_RNA.119-201ENST00000363301 96 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 RNU7-171P-201ENST00000459581 62 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 RNU6-1053P-201ENST00000515930 101 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 MIR8066-201ENST00000617280 78 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 MIR548BB-201ENST00000626714 66 ntBASIC1.61□□□□□ -2.15
ZNF28P17035 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF28P17035 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF28P17035 Y_RNA.57-201ENST00000362806 113 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 MIR1255A-201ENST00000408338 113 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 RNA5SP225-201ENST00000410874 135 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 AL161932.1-201ENST00000437408 146 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 RNU6-850P-201ENST00000516934 103 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 MIR3664-201ENST00000579074 99 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
ZNF28P17035 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ZNF28P17035 RNU6-571P-201ENST00000384128 107 ntBASIC1.59□□□□□ -2.15
ZNF28P17035 RNU4-83P-201ENST00000410863 133 ntBASIC1.59□□□□□ -2.15
ZNF28P17035 AP1B1P2-201ENST00000416196 106 ntBASIC1.59□□□□□ -2.15
ZNF28P17035 BX276092.1-201ENST00000427368 251 ntBASIC1.59□□□□□ -2.15
ZNF28P17035 RNU6-165P-201ENST00000517170 99 ntBASIC1.59□□□□□ -2.15
ZNF28P17035 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
ZNF28P17035 RNU6-53P-201ENST00000365367 106 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 Y_RNA.437-201ENST00000384113 113 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 RNU6-519P-201ENST00000410590 108 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 AL512310.8-201ENST00000550183 120 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 AC006160.2-201ENST00000637708 154 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 AC008163.1-202ENST00000636004 2889 ntBASIC1.58□□□□□ -2.16
ZNF28P17035 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF28P17035 SNORD115-27-201ENST00000364430 82 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 RNU6-580P-201ENST00000365159 107 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 RNU6-787P-201ENST00000384032 107 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 SNORD93-201ENST00000408813 74 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 MIR18B-201ENST00000454574 71 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 MIR3122-201ENST00000577243 73 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 MIR4666B-201ENST00000578142 81 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
ZNF28P17035 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ZNF28P17035 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZNF28P17035 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
ZNF28P17035 MIR4491-201ENST00000581087 68 ntBASIC1.56□□□□□ -2.16
ZNF28P17035 MIR4781-201ENST00000585250 76 ntBASIC1.56□□□□□ -2.16
ZNF28P17035 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.56□□□□□ -2.16
ZNF28P17035 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF28P17035 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ZNF28P17035 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms