Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYPP08247 RNU6-654P-201ENST00000364373 107 ntBASIC1.79□□□□□ -2.12
SYPP08247 RNU6-219P-201ENST00000364728 107 ntBASIC1.79□□□□□ -2.12
SYPP08247 RNU6-1065P-201ENST00000384513 106 ntBASIC1.79□□□□□ -2.12
SYPP08247 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
SYPP08247 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYPP08247 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYPP08247 AP1B1P2-201ENST00000416196 106 ntBASIC1.79□□□□□ -2.12
SYPP08247 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
SYPP08247 RNU6-165P-201ENST00000517170 99 ntBASIC1.79□□□□□ -2.12
SYPP08247 IGLL4P-201ENST00000614590 133 ntBASIC1.79□□□□□ -2.12
SYPP08247 MIR7111-201ENST00000619751 72 ntBASIC1.79□□□□□ -2.12
SYPP08247 MIR1245B-201ENST00000636115 69 ntBASIC1.79□□□□□ -2.12
SYPP08247 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SYPP08247 RNU6-580P-201ENST00000365159 107 ntBASIC1.78□□□□□ -2.12
SYPP08247 SNORA2B-201ENST00000384583 137 ntBASIC1.78□□□□□ -2.12
SYPP08247 MIR499A-201ENST00000384903 122 ntBASIC1.78□□□□□ -2.12
SYPP08247 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
SYPP08247 AC245517.4-201ENST00000448601 281 ntBASIC1.78□□□□□ -2.12
SYPP08247 AC022137.1-201ENST00000483735 151 ntBASIC1.78□□□□□ -2.12
SYPP08247 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
SYPP08247 AC090897.1-201ENST00000580909 226 ntBASIC1.78□□□□□ -2.12
SYPP08247 MIR4668-201ENST00000582284 70 ntBASIC1.78□□□□□ -2.12
SYPP08247 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
SYPP08247 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
SYPP08247 MT-TF-201ENST00000387314 71 ntBASIC1.77□□□□□ -2.13
SYPP08247 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
SYPP08247 Y_RNA.620-201ENST00000411009 88 ntBASIC1.77□□□□□ -2.13
SYPP08247 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
SYPP08247 RNU6-267P-201ENST00000516714 103 ntBASIC1.77□□□□□ -2.13
SYPP08247 AP003327.1-201ENST00000529684 127 ntBASIC1.77□□□□□ -2.13
SYPP08247 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
SYPP08247 AC020891.4-201ENST00000605745 93 ntBASIC1.77□□□□□ -2.13
SYPP08247 U6.109-201ENST00000636749 87 ntBASIC1.77□□□□□ -2.13
SYPP08247 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYPP08247 Y_RNA.73-201ENST00000362910 113 ntBASIC1.76□□□□□ -2.13
SYPP08247 SNORA25.9-201ENST00000365087 128 ntBASIC1.76□□□□□ -2.13
SYPP08247 RNA5SP95-201ENST00000410319 137 ntBASIC1.76□□□□□ -2.13
SYPP08247 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
SYPP08247 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
SYPP08247 AL512598.1-201ENST00000610158 273 ntBASIC1.76□□□□□ -2.13
SYPP08247 RNU6-1125P-201ENST00000363601 107 ntBASIC1.75□□□□□ -2.13
SYPP08247 RNU6-480P-201ENST00000384332 107 ntBASIC1.75□□□□□ -2.13
SYPP08247 RNY1P4-201ENST00000384595 115 ntBASIC1.75□□□□□ -2.13
SYPP08247 MIR181B2-201ENST00000385004 89 ntBASIC1.75□□□□□ -2.13
SYPP08247 SNRPGP12-201ENST00000449481 213 ntBASIC1.75□□□□□ -2.13
SYPP08247 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.75□□□□□ -2.13
SYPP08247 AL513043.2-201ENST00000573941 143 ntBASIC1.75□□□□□ -2.13
SYPP08247 MIR8070-201ENST00000616510 88 ntBASIC1.75□□□□□ -2.13
SYPP08247 AC008163.1-202ENST00000636004 2889 ntBASIC1.74□□□□□ -2.13
SYPP08247 Y_RNA.119-201ENST00000363301 96 ntBASIC1.74□□□□□ -2.13
SYPP08247 RNA5SP133-201ENST00000363368 119 ntBASIC1.74□□□□□ -2.13
SYPP08247 Y_RNA.219-201ENST00000364232 113 ntBASIC1.74□□□□□ -2.13
SYPP08247 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SYPP08247 RNA5SP489-201ENST00000410986 109 ntBASIC1.74□□□□□ -2.13
SYPP08247 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
SYPP08247 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
SYPP08247 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
SYPP08247 AC025521.1-201ENST00000621624 286 ntBASIC1.74□□□□□ -2.13
SYPP08247 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
SYPP08247 RNU6-497P-201ENST00000365316 104 ntBASIC1.73□□□□□ -2.13
SYPP08247 Y_RNA.508-201ENST00000384502 114 ntBASIC1.73□□□□□ -2.13
SYPP08247 RNU6-1275P-201ENST00000391087 107 ntBASIC1.73□□□□□ -2.13
SYPP08247 Y_RNA.609-201ENST00000410669 89 ntBASIC1.73□□□□□ -2.13
SYPP08247 RNU6-1054P-201ENST00000411293 104 ntBASIC1.73□□□□□ -2.13
SYPP08247 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.73□□□□□ -2.13
SYPP08247 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
SYPP08247 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SYPP08247 RNU6-979P-201ENST00000383896 107 ntBASIC1.72□□□□□ -2.13
SYPP08247 RNU1-78P-201ENST00000391248 165 ntBASIC1.72□□□□□ -2.13
SYPP08247 RPS27P16-201ENST00000425758 201 ntBASIC1.72□□□□□ -2.13
SYPP08247 MIR18B-201ENST00000454574 71 ntBASIC1.72□□□□□ -2.13
SYPP08247 Y_RNA.118-201ENST00000363300 101 ntBASIC1.71□□□□□ -2.14
SYPP08247 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
SYPP08247 SNORD78.1-201ENST00000390866 65 ntBASIC1.71□□□□□ -2.14
SYPP08247 RNU4-83P-201ENST00000410863 133 ntBASIC1.71□□□□□ -2.14
SYPP08247 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
SYPP08247 MIR4303-201ENST00000581299 66 ntBASIC1.71□□□□□ -2.14
SYPP08247 MIR5588-201ENST00000581890 63 ntBASIC1.71□□□□□ -2.14
SYPP08247 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
SYPP08247 RNU6-1276P-201ENST00000365372 104 ntBASIC1.7□□□□□ -2.14
SYPP08247 RNU6-571P-201ENST00000384128 107 ntBASIC1.7□□□□□ -2.14
SYPP08247 RNU6-242P-201ENST00000384359 107 ntBASIC1.7□□□□□ -2.14
SYPP08247 AC048334.1-201ENST00000477975 159 ntBASIC1.7□□□□□ -2.14
SYPP08247 Y_RNA.685-201ENST00000516532 108 ntBASIC1.7□□□□□ -2.14
SYPP08247 RNU6-850P-201ENST00000516934 103 ntBASIC1.7□□□□□ -2.14
SYPP08247 SNORD53B-201ENST00000577887 78 ntBASIC1.7□□□□□ -2.14
SYPP08247 MIR4491-201ENST00000581087 68 ntBASIC1.7□□□□□ -2.14
SYPP08247 RNU6-633P-201ENST00000362612 103 ntBASIC1.69□□□□□ -2.14
SYPP08247 MIR518E-201ENST00000385252 88 ntBASIC1.69□□□□□ -2.14
SYPP08247 Y_RNA.588-201ENST00000391254 102 ntBASIC1.69□□□□□ -2.14
SYPP08247 BX276092.1-201ENST00000427368 251 ntBASIC1.69□□□□□ -2.14
SYPP08247 AL161932.1-201ENST00000437408 146 ntBASIC1.69□□□□□ -2.14
SYPP08247 MIR4422-201ENST00000581938 83 ntBASIC1.69□□□□□ -2.14
SYPP08247 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
SYPP08247 MIR8066-201ENST00000617280 78 ntBASIC1.69□□□□□ -2.14
SYPP08247 AL161722.3-201ENST00000605789 2983 ntBASIC1.69□□□□□ -2.14
SYPP08247 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYPP08247 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
SYPP08247 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 218.7 ms