Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR605-201ENST00000385078 83 ntBASIC1.28□□□□□ -2.2
RHOP08100 MIR577-201ENST00000385196 96 ntBASIC1.28□□□□□ -2.2
RHOP08100 RNU6-910P-201ENST00000390844 107 ntBASIC1.28□□□□□ -2.2
RHOP08100 RNU6-1307P-201ENST00000391012 103 ntBASIC1.28□□□□□ -2.2
RHOP08100 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.28□□□□□ -2.2
RHOP08100 SNORA7.5-201ENST00000410672 110 ntBASIC1.28□□□□□ -2.2
RHOP08100 RNU6-537P-201ENST00000517277 103 ntBASIC1.28□□□□□ -2.2
RHOP08100 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
RHOP08100 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
RHOP08100 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
RHOP08100 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
RHOP08100 RNU6-1099P-201ENST00000363533 107 ntBASIC1.27□□□□□ -2.21
RHOP08100 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
RHOP08100 Y_RNA.448-201ENST00000384185 108 ntBASIC1.27□□□□□ -2.21
RHOP08100 RNU6-1321P-201ENST00000390905 107 ntBASIC1.27□□□□□ -2.21
RHOP08100 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
RHOP08100 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
RHOP08100 Y_RNA.818-201ENST00000618813 71 ntBASIC1.27□□□□□ -2.21
RHOP08100 RNU6-832P-201ENST00000363319 107 ntBASIC1.26□□□□□ -2.21
RHOP08100 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
RHOP08100 SNORA2B-201ENST00000384583 137 ntBASIC1.26□□□□□ -2.21
RHOP08100 AC096949.1-201ENST00000412047 152 ntBASIC1.26□□□□□ -2.21
RHOP08100 MRPL35P3-201ENST00000421557 364 ntBASIC1.26□□□□□ -2.21
RHOP08100 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
RHOP08100 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
RHOP08100 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
RHOP08100 Y_RNA.10-201ENST00000362371 110 ntBASIC1.25□□□□□ -2.21
RHOP08100 RNU4-36P-201ENST00000364294 144 ntBASIC1.25□□□□□ -2.21
RHOP08100 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
RHOP08100 Y_RNA.330-201ENST00000365230 109 ntBASIC1.25□□□□□ -2.21
RHOP08100 Y_RNA.544-201ENST00000384650 113 ntBASIC1.25□□□□□ -2.21
RHOP08100 U8.15-201ENST00000390947 134 ntBASIC1.25□□□□□ -2.21
RHOP08100 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
RHOP08100 RNU7-48P-201ENST00000458875 63 ntBASIC1.25□□□□□ -2.21
RHOP08100 RNU6-1006P-201ENST00000516998 103 ntBASIC1.25□□□□□ -2.21
RHOP08100 RNU6-158P-201ENST00000517104 100 ntBASIC1.25□□□□□ -2.21
RHOP08100 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
RHOP08100 AC141557.1-201ENST00000540982 400 ntBASIC1.25□□□□□ -2.21
RHOP08100 RMST_2.1-201ENST00000617263 136 ntBASIC1.25□□□□□ -2.21
RHOP08100 Y_RNA.98-201ENST00000363109 102 ntBASIC1.24□□□□□ -2.21
RHOP08100 RNU6-865P-201ENST00000364772 107 ntBASIC1.24□□□□□ -2.21
RHOP08100 RNY1P2-201ENST00000364820 117 ntBASIC1.24□□□□□ -2.21
RHOP08100 Y_RNA.495-201ENST00000384435 112 ntBASIC1.24□□□□□ -2.21
RHOP08100 SNORA19.1-201ENST00000410656 129 ntBASIC1.24□□□□□ -2.21
RHOP08100 UBL5P1-201ENST00000507979 193 ntBASIC1.24□□□□□ -2.21
RHOP08100 DEFB131E-201ENST00000532329 154 ntBASIC1.24□□□□□ -2.21
RHOP08100 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
RHOP08100 AC133485.1-201ENST00000567176 124 ntBASIC1.24□□□□□ -2.21
RHOP08100 MIR376B-201ENST00000614515 100 ntBASIC1.24□□□□□ -2.21
RHOP08100 AL442128.1-201ENST00000615151 90 ntBASIC1.24□□□□□ -2.21
RHOP08100 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RHOP08100 MIR34C-201ENST00000384831 77 ntBASIC1.23□□□□□ -2.21
RHOP08100 MIR590-201ENST00000385008 97 ntBASIC1.23□□□□□ -2.21
RHOP08100 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RHOP08100 Y_RNA.601-201ENST00000410500 113 ntBASIC1.23□□□□□ -2.21
RHOP08100 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.23□□□□□ -2.21
RHOP08100 RNU6-168P-201ENST00000516189 101 ntBASIC1.23□□□□□ -2.21
RHOP08100 AC105081.1-201ENST00000617727 106 ntBASIC1.23□□□□□ -2.21
RHOP08100 AP001362.1-201ENST00000625165 124 ntBASIC1.23□□□□□ -2.21
RHOP08100 AL512310.12-203ENST00000640543 90 ntBASIC1.23□□□□□ -2.21
RHOP08100 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
RHOP08100 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
RHOP08100 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
RHOP08100 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
RHOP08100 SNORD38.1-201ENST00000363863 68 ntBASIC1.21□□□□□ -2.22
RHOP08100 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
RHOP08100 MIR520E-201ENST00000384867 87 ntBASIC1.21□□□□□ -2.22
RHOP08100 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
RHOP08100 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RHOP08100 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.21□□□□□ -2.22
RHOP08100 RNA5SP89-201ENST00000410300 108 ntBASIC1.21□□□□□ -2.22
RHOP08100 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
RHOP08100 SCARNA23-201ENST00000516060 130 ntBASIC1.21□□□□□ -2.22
RHOP08100 AC138749.4-201ENST00000563970 127 ntBASIC1.21□□□□□ -2.22
RHOP08100 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
RHOP08100 AP001318.4-201ENST00000616637 121 ntBASIC1.21□□□□□ -2.22
RHOP08100 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
RHOP08100 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RHOP08100 HSBP1P2-201ENST00000299671 229 ntBASIC1.2□□□□□ -2.22
RHOP08100 Y_RNA.588-201ENST00000391254 102 ntBASIC1.2□□□□□ -2.22
RHOP08100 RNU7-185P-201ENST00000459215 60 ntBASIC1.2□□□□□ -2.22
RHOP08100 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
RHOP08100 AC096720.1-201ENST00000604441 183 ntBASIC1.2□□□□□ -2.22
RHOP08100 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
RHOP08100 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
RHOP08100 Y_RNA.93-201ENST00000363066 109 ntBASIC1.19□□□□□ -2.22
RHOP08100 SNORD45B-201ENST00000364617 72 ntBASIC1.19□□□□□ -2.22
RHOP08100 RNU1-36P-201ENST00000365130 165 ntBASIC1.19□□□□□ -2.22
RHOP08100 Y_RNA.348-201ENST00000365403 103 ntBASIC1.19□□□□□ -2.22
RHOP08100 SNORD38.2-201ENST00000384470 69 ntBASIC1.19□□□□□ -2.22
RHOP08100 MIR1257-201ENST00000408490 117 ntBASIC1.19□□□□□ -2.22
RHOP08100 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
RHOP08100 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
RHOP08100 MIR4439-201ENST00000583746 80 ntBASIC1.19□□□□□ -2.22
RHOP08100 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.19□□□□□ -2.22
RHOP08100 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RHOP08100 Y_RNA.247-201ENST00000364500 92 ntBASIC1.18□□□□□ -2.22
RHOP08100 RNU6-934P-201ENST00000365154 107 ntBASIC1.18□□□□□ -2.22
RHOP08100 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
RHOP08100 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 244.6 ms