Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.57□□□□□ -2.5
NPHP4O75161 AL121914.1-201ENST00000450188 156 ntBASIC-0.57□□□□□ -2.5
NPHP4O75161 SNORD2.1-201ENST00000458762 69 ntBASIC-0.57□□□□□ -2.5
NPHP4O75161 SNORD14C-201ENST00000365382 88 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 RNU6-474P-201ENST00000384243 107 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 RNU6-429P-201ENST00000384582 108 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 AC098479.1-201ENST00000609225 154 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 AL162726.3-218ENST00000636401 95 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 MIR4788-201ENST00000639104 80 ntBASIC-0.58□□□□□ -2.5
NPHP4O75161 SNORD114-10-201ENST00000363409 72 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 RNU6-449P-201ENST00000383914 107 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 SNORA25.13-201ENST00000516395 103 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 AC113195.1-201ENST00000579952 141 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 MIR6507-201ENST00000613630 70 ntBASIC-0.59□□□□□ -2.5
NPHP4O75161 MIR148A-201ENST00000362215 68 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 SNORD115-2-201ENST00000362842 82 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 RNU6-509P-201ENST00000363519 107 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 SNORD115-20-201ENST00000365099 82 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 MIR624-201ENST00000385217 97 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 RNU4-43P-201ENST00000410628 137 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 AC113618.1-201ENST00000416747 285 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 AC244250.2-201ENST00000418731 148 ntBASIC-0.6□□□□□ -2.51
NPHP4O75161 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 U8.6-201ENST00000364939 135 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 MTND5P20-201ENST00000448677 143 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 MIR1270-201ENST00000459320 83 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 MIR3920-201ENST00000581751 86 ntBASIC-0.61□□□□□ -2.51
NPHP4O75161 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 SNORD75.1-201ENST00000408373 60 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 AC109327.2-201ENST00000448339 378 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 MIR4473-201ENST00000583731 91 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 RNU7-10P-201ENST00000607194 63 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.62□□□□□ -2.51
NPHP4O75161 MIR655-201ENST00000362159 97 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 RNU4-17P-201ENST00000365598 141 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 RNU6-811P-201ENST00000384069 107 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 RNU2-35P-201ENST00000516446 142 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 RNU6-988P-201ENST00000519081 107 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.63□□□□□ -2.51
NPHP4O75161 MTND4P29-201ENST00000503122 1372 ntBASIC-0.63□□□□□ -2.51
NPHP4O75161 RNA5SP205-201ENST00000364653 136 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 AC097635.1-201ENST00000450678 155 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 RNU7-195P-201ENST00000458793 62 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 MIR4744-201ENST00000581563 82 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 SNORD114-11-201ENST00000363738 75 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 RNY3P16-201ENST00000516338 101 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 RNU7-188P-201ENST00000517063 64 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 MIR4263-201ENST00000584745 83 ntBASIC-0.64□□□□□ -2.51
NPHP4O75161 RNU6-690P-201ENST00000365242 106 ntBASIC-0.65□□□□□ -2.51
NPHP4O75161 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.65□□□□□ -2.51
NPHP4O75161 RNU7-13P-201ENST00000516413 62 ntBASIC-0.65□□□□□ -2.51
NPHP4O75161 U2.14-201ENST00000615943 113 ntBASIC-0.65□□□□□ -2.51
NPHP4O75161 RNU1-141P-201ENST00000364623 158 ntBASIC-0.66□□□□□ -2.52
NPHP4O75161 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.66□□□□□ -2.52
NPHP4O75161 RNU6-480P-201ENST00000384332 107 ntBASIC-0.66□□□□□ -2.52
NPHP4O75161 MIR4282-201ENST00000583613 67 ntBASIC-0.66□□□□□ -2.52
NPHP4O75161 RNU4-32P-201ENST00000363404 141 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 RNU6-103P-201ENST00000363686 107 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 MIR206-201ENST00000384872 86 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 RNU6-578P-201ENST00000390980 103 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 SNORD63B-201ENST00000411005 70 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 RNU7-48P-201ENST00000458875 63 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 MIR4680-201ENST00000580906 66 ntBASIC-0.67□□□□□ -2.52
NPHP4O75161 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.68□□□□□ -2.52
NPHP4O75161 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.68□□□□□ -2.52
NPHP4O75161 RNU6-524P-201ENST00000384270 107 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms