Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
HMGB3O15347 AL606845.1-201ENST00000404881 255 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 RNA5SP180-201ENST00000516181 101 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 snoU18.1-201ENST00000629629 71 ntBASIC-1.81□□□□□ -2.7
HMGB3O15347 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 RNU6-102P-201ENST00000384485 104 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 RNU6-130P-201ENST00000411112 103 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 SERF1AP1-201ENST00000514575 187 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 SNORA40.14-201ENST00000516543 86 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 MIR3974-201ENST00000637126 96 ntBASIC-1.82□□□□□ -2.7
HMGB3O15347 RNU4-90P-201ENST00000362773 141 ntBASIC-1.83□□□□□ -2.7
HMGB3O15347 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.83□□□□□ -2.7
HMGB3O15347 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.83□□□□□ -2.7
HMGB3O15347 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.83□□□□□ -2.7
HMGB3O15347 MTATP6P19-201ENST00000413797 659 ntBASIC-1.83□□□□□ -2.7
HMGB3O15347 RNU6-662P-201ENST00000384253 104 ntBASIC-1.84□□□□□ -2.7
HMGB3O15347 RNU6-905P-201ENST00000384434 107 ntBASIC-1.84□□□□□ -2.7
HMGB3O15347 AL353813.1-201ENST00000440700 253 ntBASIC-1.84□□□□□ -2.7
HMGB3O15347 MTND4LP30-201ENST00000454092 297 ntBASIC-1.84□□□□□ -2.7
HMGB3O15347 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.84□□□□□ -2.7
HMGB3O15347 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 MIR1285-2-201ENST00000408311 88 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 SNX3P1X-201ENST00000414887 175 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.85□□□□□ -2.71
HMGB3O15347 MIR5591-201ENST00000578248 65 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.85□□□□□ -2.71
HMGB3O15347 AL138825.1-201ENST00000618587 192 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 AC078883.4-201ENST00000623218 367 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 MIR198-201ENST00000637333 62 ntBASIC-1.85□□□□□ -2.71
HMGB3O15347 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 RNU6-472P-201ENST00000384299 107 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 MIR516A2-201ENST00000384888 90 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 MIR516A1-201ENST00000385033 90 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 MIR624-201ENST00000385217 97 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 MIR616-201ENST00000385293 97 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.86□□□□□ -2.71
HMGB3O15347 MTND4P17-201ENST00000470444 350 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 RNU7-30P-201ENST00000516835 62 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 RNU6-850P-201ENST00000516934 103 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 AC022079.1-201ENST00000621546 602 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 AC112487.2-201ENST00000637950 304 ntBASIC-1.86□□□□□ -2.71
HMGB3O15347 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.87□□□□□ -2.71
HMGB3O15347 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 RNU6-453P-201ENST00000516819 85 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 SNORD116.3-201ENST00000517176 78 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 AC132825.6-201ENST00000638861 357 ntBASIC-1.87□□□□□ -2.71
HMGB3O15347 SNORA79-201ENST00000408376 140 ntBASIC-1.88□□□□□ -2.71
HMGB3O15347 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.88□□□□□ -2.71
HMGB3O15347 RNU4-69P-201ENST00000410677 143 ntBASIC-1.88□□□□□ -2.71
HMGB3O15347 RNU2-35P-201ENST00000516446 142 ntBASIC-1.88□□□□□ -2.71
HMGB3O15347 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.88□□□□□ -2.71
HMGB3O15347 RNU2-4P-201ENST00000606190 192 ntBASIC-1.88□□□□□ -2.71
HMGB3O15347 RNU6-845P-201ENST00000362578 103 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 RNU6-728P-201ENST00000365375 104 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 MIR601-201ENST00000385256 79 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 MIR548E-201ENST00000408287 88 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 SNORD18.2-201ENST00000459604 70 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 SNORA20.3-201ENST00000516880 132 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 MIR548O2-201ENST00000616090 70 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 AC087741.2-201ENST00000619415 172 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 TRDV1-202ENST00000621643 102 ntBASIC-1.89□□□□□ -2.71
HMGB3O15347 RNU6-978P-201ENST00000364371 103 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 MIR582-201ENST00000365731 98 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 MIR216B-201ENST00000390186 82 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 MIR4770-201ENST00000579149 58 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 MIR376B-201ENST00000614515 100 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 U6.100-201ENST00000636230 99 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 MIR1246-201ENST00000636535 73 ntBASIC-1.9□□□□□ -2.71
HMGB3O15347 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 RNU6-211P-201ENST00000384047 107 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.91□□□□□ -2.72
HMGB3O15347 SNORD115-46-201ENST00000390982 71 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms