Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.74□□□□□ -2.53
UBFD1O14562 RNU7-13P-201ENST00000516413 62 ntBASIC-0.74□□□□□ -2.53
UBFD1O14562 AP001328.1-201ENST00000528550 176 ntBASIC-0.74□□□□□ -2.53
UBFD1O14562 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
UBFD1O14562 MTND5P40-201ENST00000559945 246 ntBASIC-0.74□□□□□ -2.53
UBFD1O14562 MIR548AG2-201ENST00000581228 64 ntBASIC-0.74□□□□□ -2.53
UBFD1O14562 MIR548AE1-201ENST00000583292 70 ntBASIC-0.74□□□□□ -2.53
UBFD1O14562 RNU6-770P-201ENST00000363929 105 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 RNU4-84P-201ENST00000364200 139 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 RNU6-381P-201ENST00000391259 108 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 MTND5P22-201ENST00000458380 195 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 SERF1AP1-201ENST00000514575 187 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 RNA5SP169-201ENST00000517268 117 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 YWHAEP2-201ENST00000580066 112 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 MIR4436A-201ENST00000585278 85 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 uc_338.10-201ENST00000621872 182 ntBASIC-0.75□□□□□ -2.53
UBFD1O14562 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 RNU6-728P-201ENST00000365375 104 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 RNU6-524P-201ENST00000384270 107 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 RNU6-455P-201ENST00000384681 107 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 SNORA79-201ENST00000408376 140 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 FGF7P4-201ENST00000509595 295 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 RNY3P15-201ENST00000516297 97 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 RNU2-35P-201ENST00000516446 142 ntBASIC-0.76□□□□□ -2.53
UBFD1O14562 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 MIR519E-201ENST00000385075 84 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 MIR624-201ENST00000385217 97 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 AL603914.1-201ENST00000401964 204 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 RNU4-43P-201ENST00000410628 137 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 SNORD63B-201ENST00000411005 70 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 AC093423.1-201ENST00000440817 142 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 RNU7-106P-201ENST00000459514 67 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 SNORD116-25-201ENST00000516517 92 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 SNORA40.15-201ENST00000516884 107 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 RNA5SP66-201ENST00000517178 101 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.77□□□□□ -2.53
UBFD1O14562 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 MIR539-201ENST00000365690 78 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 RNU6-570P-201ENST00000517051 105 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 AL442663.2-201ENST00000554385 511 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 AC069503.3-201ENST00000618674 145 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 AL365265.1-201ENST00000621045 234 ntBASIC-0.78□□□□□ -2.53
UBFD1O14562 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.79□□□□□ -2.54
UBFD1O14562 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.79□□□□□ -2.54
UBFD1O14562 SNX3P1X-201ENST00000414887 175 ntBASIC-0.79□□□□□ -2.54
UBFD1O14562 SNORD2.1-201ENST00000458762 69 ntBASIC-0.79□□□□□ -2.54
UBFD1O14562 RNU7-74P-201ENST00000459104 62 ntBASIC-0.79□□□□□ -2.54
UBFD1O14562 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.79□□□□□ -2.54
UBFD1O14562 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.79□□□□□ -2.54
UBFD1O14562 RNU4-40P-201ENST00000364351 143 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 MIR9-2-201ENST00000384838 87 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 MIR206-201ENST00000384872 86 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 MIR519A1-201ENST00000385257 85 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 SNORA3B-201ENST00000391305 131 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 MIR548I2-201ENST00000408348 149 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 RNU6-101P-201ENST00000410323 104 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 MIR1468-201ENST00000410600 86 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 RNU7-48P-201ENST00000458875 63 ntBASIC-0.8□□□□□ -2.54
UBFD1O14562 SNORD114-14-201ENST00000362723 75 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 AL121914.1-201ENST00000450188 156 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 U6atac.1-201ENST00000616025 117 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 AC090971.5-201ENST00000621102 293 ntBASIC-0.81□□□□□ -2.54
UBFD1O14562 MIR369-201ENST00000362155 70 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 SNORD114-29-201ENST00000364819 70 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 RNU6-47P-201ENST00000383866 107 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 RNU6-154P-201ENST00000384306 106 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 MIR617-201ENST00000385030 97 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 AL445193.1-201ENST00000441183 141 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 AC009779.6-201ENST00000603972 165 ntBASIC-0.82□□□□□ -2.54
UBFD1O14562 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.83□□□□□ -2.54
UBFD1O14562 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.83□□□□□ -2.54
UBFD1O14562 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.83□□□□□ -2.54
UBFD1O14562 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.83□□□□□ -2.54
UBFD1O14562 MIR4460-201ENST00000577862 86 ntBASIC-0.83□□□□□ -2.54
UBFD1O14562 RNU6-170P-201ENST00000362832 104 ntBASIC-0.84□□□□□ -2.54
UBFD1O14562 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.84□□□□□ -2.54
UBFD1O14562 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.84□□□□□ -2.54
UBFD1O14562 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.84□□□□□ -2.54
UBFD1O14562 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.84□□□□□ -2.54
UBFD1O14562 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.84□□□□□ -2.54
UBFD1O14562 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms