Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR1827-201ENST00000408549 66 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-447P-201ENST00000410293 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1118P-201ENST00000410382 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1076P-201ENST00000410397 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-355P-201ENST00000410427 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-791P-201ENST00000410467 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-705P-201ENST00000410601 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1100P-201ENST00000410691 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-860P-201ENST00000410860 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-1217P-201ENST00000411276 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 RNU6-785P-201ENST00000411324 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 FABP5P4-201ENST00000437203 171 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 SNORD67.1-201ENST00000516618 108 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 U6.90-201ENST00000614007 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 U6.70-201ENST00000620287 104 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 AC010487.4-201ENST00000637027 61 ntBASIC1.42□□□□□ -2.18
CCDC85CA6NKD9 Y_RNA.281-201ENST00000364774 94 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 RNU6-616P-201ENST00000384353 107 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 RNU6-994P-201ENST00000410507 111 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 SNORD83.1-201ENST00000411362 77 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 RPS29P28-201ENST00000446439 141 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 RNU7-185P-201ENST00000459215 60 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 RPL39P34-201ENST00000477141 156 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 Y_RNA.773-201ENST00000607168 90 ntBASIC1.41□□□□□ -2.18
CCDC85CA6NKD9 SNORD114-24-201ENST00000365029 72 ntBASIC1.4□□□□□ -2.19
CCDC85CA6NKD9 SNORD116-21-201ENST00000384507 92 ntBASIC1.4□□□□□ -2.19
CCDC85CA6NKD9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.4□□□□□ -2.19
CCDC85CA6NKD9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC85CA6NKD9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.4□□□□□ -2.19
CCDC85CA6NKD9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC85CA6NKD9 SNORD115-35-201ENST00000365122 82 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 MIR206-201ENST00000384872 86 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 MIR548A1-201ENST00000385041 97 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 MIR1257-201ENST00000408490 117 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 AC067940.1-201ENST00000458411 300 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 RNU7-2P-201ENST00000516096 62 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 AL035470.1-201ENST00000622571 220 ntBASIC1.39□□□□□ -2.19
CCDC85CA6NKD9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 RNU1-36P-201ENST00000365130 165 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 MIR125B2-201ENST00000385128 89 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 U7.7-201ENST00000459276 60 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 SNORD124-201ENST00000459577 104 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 MTND5P34-201ENST00000568888 325 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 AC020891.4-201ENST00000605745 93 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 AL162726.3-218ENST00000636401 95 ntBASIC1.38□□□□□ -2.19
CCDC85CA6NKD9 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
CCDC85CA6NKD9 RNU6-363P-201ENST00000362895 105 ntBASIC1.37□□□□□ -2.19
CCDC85CA6NKD9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.37□□□□□ -2.19
CCDC85CA6NKD9 RPL39P25-201ENST00000449384 154 ntBASIC1.37□□□□□ -2.19
CCDC85CA6NKD9 MIR1255B1-201ENST00000636325 63 ntBASIC1.37□□□□□ -2.19
CCDC85CA6NKD9 AC023934.1-201ENST00000574529 2389 ntBASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 MIR1-1-201ENST00000362147 71 ntBASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 RNU6-1290P-201ENST00000362957 109 ntBASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 MIR1197-201ENST00000408818 88 ntBASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 MIR1912-201ENST00000410389 80 ntBASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 AL136317.1-201ENST00000612653 226 ntBASIC1.36□□□□□ -2.19
CCDC85CA6NKD9 Y_RNA.35-201ENST00000362601 101 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 Y_RNA.309-201ENST00000365046 111 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 RNU6-429P-201ENST00000384582 108 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 Y_RNA.549-201ENST00000384657 102 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 SNORD93-201ENST00000408813 74 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 RNU6-412P-201ENST00000516434 106 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 RNU6-589P-201ENST00000516485 107 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 MIR4804-201ENST00000581683 73 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 SNORD92-201ENST00000585078 85 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.35□□□□□ -2.19
CCDC85CA6NKD9 RNU4-67P-201ENST00000364569 141 ntBASIC1.34□□□□□ -2.19
CCDC85CA6NKD9 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
CCDC85CA6NKD9 AC133485.1-201ENST00000567176 124 ntBASIC1.34□□□□□ -2.19
CCDC85CA6NKD9 MIR4491-201ENST00000581087 68 ntBASIC1.34□□□□□ -2.19
CCDC85CA6NKD9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.507-201ENST00000384500 99 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 MIR942-201ENST00000401111 86 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNU7-48P-201ENST00000458875 63 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNA5SP255-201ENST00000516370 107 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNU6-1018P-201ENST00000516577 106 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNU6-521P-201ENST00000516663 105 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 RNU6-765P-201ENST00000516916 99 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 MIR6129-201ENST00000616087 109 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 MIR8066-201ENST00000617280 78 ntBASIC1.33□□□□□ -2.2
CCDC85CA6NKD9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.49-201ENST00000362714 112 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.98-201ENST00000363109 102 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.323-201ENST00000365157 109 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.32□□□□□ -2.2
CCDC85CA6NKD9 MIR100-201ENST00000385259 80 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms