Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNU6-86P-201ENST00000606534 107 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.74□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 MIR1252-201ENST00000408861 65 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 RNU4-43P-201ENST00000410628 137 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 RNU7-113P-201ENST00000459273 62 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 IGKV1-22-201ENST00000524313 326 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 AP000676.1-201ENST00000533307 52 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 AC093783.1-201ENST00000612976 329 ntBASIC-0.75□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.76□□□□□ -2.53
RBFOX3A6NFN3 RNY1P6-201ENST00000384193 109 ntBASIC-0.76□□□□□ -2.53
RBFOX3A6NFN3 RNU6-524P-201ENST00000384270 107 ntBASIC-0.76□□□□□ -2.53
RBFOX3A6NFN3 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.76□□□□□ -2.53
RBFOX3A6NFN3 RNU6-901P-201ENST00000384593 106 ntBASIC-0.76□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.76□□□□□ -2.53
RBFOX3A6NFN3 RNU6-728P-201ENST00000365375 104 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 RNU6-823P-201ENST00000391042 103 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 SNORD63B-201ENST00000411005 70 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 AC082651.2-201ENST00000496833 166 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 SERF1AP1-201ENST00000514575 187 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 MIR6851-201ENST00000617060 67 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.77□□□□□ -2.53
RBFOX3A6NFN3 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 MIR617-201ENST00000385030 97 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 MIR624-201ENST00000385217 97 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 MIR519A1-201ENST00000385257 85 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 SNORD83B-201ENST00000386745 93 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 snoU13.13-201ENST00000458842 104 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 SNORA40.15-201ENST00000516884 107 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 MIR4460-201ENST00000577862 86 ntBASIC-0.78□□□□□ -2.53
RBFOX3A6NFN3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 RNU6-721P-201ENST00000410155 105 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 MIR1270-201ENST00000459320 83 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 RNU6-561P-201ENST00000516222 102 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 MIR548AX-201ENST00000580117 73 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 AC011603.4-201ENST00000611325 277 ntBASIC-0.79□□□□□ -2.54
RBFOX3A6NFN3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 RNU4-40P-201ENST00000364351 143 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 RNU6-978P-201ENST00000364371 103 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 RNU6-381P-201ENST00000391259 108 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 SNORD2.1-201ENST00000458762 69 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 RNU7-106P-201ENST00000459514 67 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 RNA5SP67-201ENST00000516422 131 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 SNORD116-25-201ENST00000516517 92 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 MIR3681-201ENST00000580089 72 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 AC145423.2-201ENST00000610631 239 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 U4.1-201ENST00000620349 87 ntBASIC-0.8□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 RNU6-770P-201ENST00000363929 105 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 SNORD115-44-201ENST00000365391 82 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 SNORA51.5-201ENST00000384126 131 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 MIR548I2-201ENST00000408348 149 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 MTATP6P23-201ENST00000440153 476 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 SCARNA17-201ENST00000516183 144 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 AP001328.1-201ENST00000528550 176 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 AC090971.5-201ENST00000621102 293 ntBASIC-0.81□□□□□ -2.54
RBFOX3A6NFN3 MIR20A-201ENST00000362279 71 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 RNU6-170P-201ENST00000362832 104 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 SNORD114-25-201ENST00000363742 72 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 RNU6-450P-201ENST00000364654 107 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 MIR206-201ENST00000384872 86 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 SNORA49-201ENST00000386157 136 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 RNU6-101P-201ENST00000410323 104 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 AL500527.2-201ENST00000454105 95 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 RNU7-48P-201ENST00000458875 63 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 MIR2113-201ENST00000459007 91 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 snoU13.11-201ENST00000459219 104 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 MTND5P18-201ENST00000445624 1801 ntBASIC-0.82□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 MIR652-201ENST00000385278 98 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 MT-TY-201ENST00000387409 66 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 ELOCP20-201ENST00000422460 345 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms