Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.2□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR206-201ENST00000384872 86 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 FABP5P4-201ENST00000437203 171 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 AL359821.1-201ENST00000605519 182 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR1255B1-201ENST00000636325 63 ntBASIC1.19□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-834P-201ENST00000362367 110 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORA63.5-201ENST00000363548 123 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.273-201ENST00000364703 102 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU1-36P-201ENST00000365130 165 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-880P-201ENST00000384526 107 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD89-201ENST00000390981 114 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU7-2P-201ENST00000516096 62 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-977P-201ENST00000516411 103 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC133485.1-201ENST00000567176 124 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR4676-201ENST00000583078 72 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC020891.4-201ENST00000605745 93 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 AL035470.1-201ENST00000622571 220 ntBASIC1.18□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-1290P-201ENST00000362957 109 ntBASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 TRMT112P2-201ENST00000512910 132 ntBASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 AL136317.1-201ENST00000612653 226 ntBASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR6129-201ENST00000616087 109 ntBASIC1.17□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.35-201ENST00000362601 101 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-403P-201ENST00000363163 104 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR125B2-201ENST00000385128 89 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR1827-201ENST00000408549 66 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU4-83P-201ENST00000410863 133 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 RNU6-321P-201ENST00000410912 106 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 Y_RNA.629-201ENST00000411368 105 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 MIR4679-2-201ENST00000578358 77 ntBASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
NIPSNAP3AQ9UFN0 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 SNORD115-35-201ENST00000365122 82 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-364P-201ENST00000384387 107 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 SNORA72.6-201ENST00000384520 129 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-816P-201ENST00000390914 107 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 SNORA40.6-201ENST00000391153 128 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1268P-201ENST00000391214 107 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1239P-201ENST00000391310 107 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-521P-201ENST00000516663 105 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 Y_RNA.155-201ENST00000363632 101 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU4-67P-201ENST00000364569 141 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-865P-201ENST00000364772 107 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 MIR520F-201ENST00000384824 87 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 MIR938-201ENST00000401216 83 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-447P-201ENST00000410293 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-355P-201ENST00000410427 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-791P-201ENST00000410467 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-705P-201ENST00000410601 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 SNORA7.5-201ENST00000410672 110 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-860P-201ENST00000410860 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-785P-201ENST00000411324 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 U7.7-201ENST00000459276 60 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RPL39P34-201ENST00000477141 156 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU7-156P-201ENST00000517214 74 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 U6.90-201ENST00000614007 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 U6.70-201ENST00000620287 104 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 AL162726.3-218ENST00000636401 95 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 U6.109-201ENST00000636749 87 ntBASIC1.14□□□□□ -2.23
NIPSNAP3AQ9UFN0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 Y_RNA.309-201ENST00000365046 111 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU7-48P-201ENST00000458875 63 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-412P-201ENST00000516434 106 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 DEFB131E-201ENST00000532329 154 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 MIR4491-201ENST00000581087 68 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 MIR4804-201ENST00000581683 73 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.13□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNU6-363P-201ENST00000362895 105 ntBASIC1.12□□□□□ -2.23
NIPSNAP3AQ9UFN0 RNA5SP133-201ENST00000363368 119 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 1167.8 ms