Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AP001362.1-201ENST00000625165 124 ntBASIC1.68□□□□□ -2.14
VTI1BQ9UEU0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 RNY1P2-201ENST00000364820 117 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 MIR1257-201ENST00000408490 117 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 SNORD93-201ENST00000408813 74 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 RNU6-994P-201ENST00000410507 111 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 SNORA19.1-201ENST00000410656 129 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 AC002429.1-201ENST00000437672 148 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 RNU7-185P-201ENST00000459215 60 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 DEFB131E-201ENST00000532329 154 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 MIR3613-201ENST00000579844 87 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 AL442128.1-201ENST00000615151 90 ntBASIC1.67□□□□□ -2.14
VTI1BQ9UEU0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 RNU1-36P-201ENST00000365130 165 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 UBL5P1-201ENST00000507979 193 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 RNU7-40P-201ENST00000516397 64 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 MIR4771-2-201ENST00000577758 74 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 MIR4771-1-201ENST00000582617 74 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.66□□□□□ -2.14
VTI1BQ9UEU0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 RNU6-32P-201ENST00000383948 107 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 RNU6-13P-201ENST00000384248 107 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 RNU6-12P-201ENST00000384604 107 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 RNU6-41P-201ENST00000384741 107 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 AC138749.4-201ENST00000563970 127 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 AC084768.2-201ENST00000622736 221 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 U6.109-201ENST00000636749 87 ntBASIC1.65□□□□□ -2.15
VTI1BQ9UEU0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
VTI1BQ9UEU0 RPS26P5-201ENST00000418544 335 ntBASIC1.64□□□□□ -2.15
VTI1BQ9UEU0 RPS29P28-201ENST00000446439 141 ntBASIC1.64□□□□□ -2.15
VTI1BQ9UEU0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.64□□□□□ -2.15
VTI1BQ9UEU0 RPS29P23-201ENST00000458635 123 ntBASIC1.64□□□□□ -2.15
VTI1BQ9UEU0 RNU6-1006P-201ENST00000516998 103 ntBASIC1.64□□□□□ -2.15
VTI1BQ9UEU0 RNA5SP133-201ENST00000363368 119 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 MIR590-201ENST00000385008 97 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 RNU6-537P-201ENST00000517277 103 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 MIR4491-201ENST00000581087 68 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 AC096720.1-201ENST00000604441 183 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.818-201ENST00000618813 71 ntBASIC1.63□□□□□ -2.15
VTI1BQ9UEU0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 SNORD38.1-201ENST00000363863 68 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 MIR19B1-201ENST00000384829 87 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.601-201ENST00000410500 113 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 AC015818.7-201ENST00000428754 109 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 AC087499.7-201ENST00000441958 109 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 AC019288.1-201ENST00000557918 224 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 MIR7843-201ENST00000622274 79 ntBASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VTI1BQ9UEU0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.495-201ENST00000384435 112 ntBASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 SNORD38.2-201ENST00000384470 69 ntBASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.544-201ENST00000384650 113 ntBASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 RNU4-83P-201ENST00000410863 133 ntBASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 AC020891.4-201ENST00000605745 93 ntBASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
VTI1BQ9UEU0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 RNU6-53P-201ENST00000365367 106 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 MIR125B2-201ENST00000385128 89 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 AC067940.1-201ENST00000458411 300 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 snoU13.23-201ENST00000458863 104 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 MIR4676-201ENST00000583078 72 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 AC104984.5-201ENST00000586878 94 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 MIR6715A-201ENST00000615929 79 ntBASIC1.6□□□□□ -2.15
VTI1BQ9UEU0 RNU6-369P-201ENST00000362515 102 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 Y_RNA.247-201ENST00000364500 92 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 SNORD45B-201ENST00000364617 72 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 SCARNA23-201ENST00000516060 130 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 RNU6-548P-201ENST00000517083 115 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.59□□□□□ -2.15
VTI1BQ9UEU0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 RNU6-403P-201ENST00000363163 104 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 Y_RNA.119-201ENST00000363301 96 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 SNORA72.6-201ENST00000384520 129 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 Y_RNA.659-201ENST00000515994 113 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 RNU6-168P-201ENST00000516189 101 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 AC090897.1-201ENST00000580909 226 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
VTI1BQ9UEU0 HSBP1P2-201ENST00000299671 229 ntBASIC1.57□□□□□ -2.16
VTI1BQ9UEU0 MIR764-201ENST00000390811 85 ntBASIC1.57□□□□□ -2.16
VTI1BQ9UEU0 MIR1827-201ENST00000408549 66 ntBASIC1.57□□□□□ -2.16
VTI1BQ9UEU0 SNORA25.16-201ENST00000516741 121 ntBASIC1.57□□□□□ -2.16
VTI1BQ9UEU0 AC015712.3-201ENST00000559380 164 ntBASIC1.57□□□□□ -2.16
VTI1BQ9UEU0 MIR1-1-201ENST00000362147 71 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 287.3 ms