Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL670379.3-201ENST00000605040 251 ntBASIC1.16□□□□□ -2.22
USP29Q9HBJ7 RNU6-834P-201ENST00000362367 110 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 SNORD115-19-201ENST00000363098 82 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 SNORD115-18-201ENST00000363293 82 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 SNORD115-17-201ENST00000364612 82 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 RNU6-949P-201ENST00000384040 107 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 MIR548D2-201ENST00000384955 97 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 AC096949.1-201ENST00000412047 152 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 MIR18B-201ENST00000454574 71 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.15□□□□□ -2.23
USP29Q9HBJ7 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 RNY4P6-201ENST00000363667 96 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 MIR548A3-201ENST00000385297 97 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 MT-TF-201ENST00000387314 71 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 MIR759-201ENST00000390224 91 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 MIR4679-2-201ENST00000578358 77 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.14□□□□□ -2.23
USP29Q9HBJ7 RNU6-94P-201ENST00000607728 107 ntBASIC1.14□□□□□ -2.23
USP29Q9HBJ7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
USP29Q9HBJ7 MIR96-201ENST00000362288 78 ntBASIC1.13□□□□□ -2.23
USP29Q9HBJ7 RNU6-1290P-201ENST00000362957 109 ntBASIC1.13□□□□□ -2.23
USP29Q9HBJ7 RNU6-616P-201ENST00000384353 107 ntBASIC1.13□□□□□ -2.23
USP29Q9HBJ7 MIR548A1-201ENST00000385041 97 ntBASIC1.13□□□□□ -2.23
USP29Q9HBJ7 AC007012.1-201ENST00000567192 175 ntBASIC1.13□□□□□ -2.23
USP29Q9HBJ7 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
USP29Q9HBJ7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.13□□□□□ -2.23
USP29Q9HBJ7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
USP29Q9HBJ7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.273-201ENST00000364703 102 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RNU6-934P-201ENST00000365154 107 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RNU6-476P-201ENST00000384726 107 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 SNORD83.1-201ENST00000411362 77 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 SNORD67.1-201ENST00000516618 108 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 RNU7-137P-201ENST00000516788 62 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 MIR548AI-201ENST00000579940 88 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
USP29Q9HBJ7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
USP29Q9HBJ7 SNORD114-26-201ENST00000363543 72 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 RNU6-429P-201ENST00000384582 108 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 MIR598-201ENST00000384868 97 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 SNORD77B-201ENST00000391112 67 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.629-201ENST00000411368 105 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 FAM71BP1-201ENST00000604431 523 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 AL035470.1-201ENST00000622571 220 ntBASIC1.11□□□□□ -2.23
USP29Q9HBJ7 SNORD114-10-201ENST00000363409 72 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 RPS26P5-201ENST00000418544 335 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.1□□□□□ -2.23
USP29Q9HBJ7 MTND5P34-201ENST00000568888 325 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.1□□□□□ -2.23
USP29Q9HBJ7 AC020891.4-201ENST00000605745 93 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 MIR6788-201ENST00000618842 66 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 MIR1255B1-201ENST00000636325 63 ntBASIC1.1□□□□□ -2.23
USP29Q9HBJ7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.1□□□□□ -2.23
USP29Q9HBJ7 AL589743.1-201ENST00000551932 2712 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 SNORD116-21-201ENST00000384507 92 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 MIR206-201ENST00000384872 86 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 AC015818.7-201ENST00000428754 109 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 AC087499.7-201ENST00000441958 109 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 RNU7-185P-201ENST00000459215 60 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 MIR6129-201ENST00000616087 109 ntBASIC1.09□□□□□ -2.23
USP29Q9HBJ7 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USP29Q9HBJ7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 RNU1-36P-201ENST00000365130 165 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 RNU6-1056P-201ENST00000383996 107 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 RPL39P34-201ENST00000477141 156 ntBASIC1.08□□□□□ -2.24
USP29Q9HBJ7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
USP29Q9HBJ7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
USP29Q9HBJ7 SNORD115-35-201ENST00000365122 82 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 MIR1827-201ENST00000408549 66 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 AL353813.1-201ENST00000440700 253 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 RNU7-2P-201ENST00000516096 62 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms