Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 MIR6841-201ENST00000637129 72 ntBASIC-0.32□□□□□ -2.46
SHANK3Q9BYB0 SNORD114-10-201ENST00000363409 72 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MIR624-201ENST00000385217 97 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 SNORD41.1-201ENST00000391000 69 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 RNY3P15-201ENST00000516297 97 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MIR3925-201ENST00000584674 77 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 RNU4-32P-201ENST00000363404 141 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 RNA5SP245-201ENST00000364239 121 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 RNU6-449P-201ENST00000383914 107 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MT-TD-201ENST00000387419 68 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MIR4263-201ENST00000584745 83 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MIR3666-201ENST00000607845 111 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.33□□□□□ -2.46
SHANK3Q9BYB0 MIR335-201ENST00000362173 94 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 SNORD115-2-201ENST00000362842 82 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 RNY3P1-201ENST00000365085 102 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 SNORD115-20-201ENST00000365099 82 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 SNORA22B-201ENST00000383876 138 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 RNY1P6-201ENST00000384193 109 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 MTATP6P23-201ENST00000440153 476 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 SNORD2.1-201ENST00000458762 69 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 RNU7-113P-201ENST00000459273 62 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 RNU6-138P-201ENST00000515952 107 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 RNU6-570P-201ENST00000517051 105 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 RNU7-161P-201ENST00000517289 62 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 MIR4677-201ENST00000584153 80 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 AL356055.1-201ENST00000602528 446 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 AC011921.3-201ENST00000605540 361 ntBASIC-0.34□□□□□ -2.46
SHANK3Q9BYB0 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 RNU6-103P-201ENST00000363686 107 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 AL162726.3-218ENST00000636401 95 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 MTND5P32-201ENST00000560711 1802 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 MIR369-201ENST00000362155 70 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 SNORD115-24-201ENST00000363528 82 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 RNA5SP33-201ENST00000516687 98 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 MIR4744-201ENST00000581563 82 ntBASIC-0.35□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 RNU6-806P-201ENST00000365147 105 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 RNU7-74P-201ENST00000459104 62 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.36□□□□□ -2.47
SHANK3Q9BYB0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 RNY1P2-201ENST00000364820 117 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 SNORD110-201ENST00000408189 75 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 SCARNA15-202ENST00000516881 127 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 AL442067.1-201ENST00000613261 223 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 U4.2-201ENST00000618561 85 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 uc_338.36-201ENST00000622331 158 ntBASIC-0.37□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 RNU6-988P-201ENST00000519081 107 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 AC011603.4-201ENST00000611325 277 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 uc_338.10-201ENST00000621872 182 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 SNORA63.5-201ENST00000363548 123 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 AC109327.2-201ENST00000448339 378 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 MIR4795-201ENST00000584182 89 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 AC084368.1-201ENST00000620935 65 ntBASIC-0.38□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.39□□□□□ -2.47
SHANK3Q9BYB0 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms