Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
TRAIPQ9BWF2 AC087741.2-201ENST00000619415 172 ntBASIC1.66□□□□□ -2.14
TRAIPQ9BWF2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-19-201ENST00000363098 82 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU6-403P-201ENST00000363163 104 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNY1P10-201ENST00000363268 113 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-18-201ENST00000363293 82 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-17-201ENST00000364612 82 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU1-36P-201ENST00000365130 165 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 U8.15-201ENST00000390947 134 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 MIR1827-201ENST00000408549 66 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU4-83P-201ENST00000410863 133 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 RNU7-2P-201ENST00000516096 62 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 AC025627.3-201ENST00000582078 182 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 MIR4676-201ENST00000583078 72 ntBASIC1.65□□□□□ -2.15
TRAIPQ9BWF2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.353-201ENST00000365440 108 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 MIR125B2-201ENST00000385128 89 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 RNU6-735P-201ENST00000410612 107 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 DEFB131E-201ENST00000532329 154 ntBASIC1.64□□□□□ -2.15
TRAIPQ9BWF2 RNU6-865P-201ENST00000364772 107 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 SNORD116-21-201ENST00000384507 92 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU6-880P-201ENST00000384526 107 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU6-476P-201ENST00000384726 107 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 MIR520F-201ENST00000384824 87 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 MIR548I2-201ENST00000408348 149 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 PDCD5P2-201ENST00000507570 312 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU6-412P-201ENST00000516434 106 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 RNU7-156P-201ENST00000517214 74 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 AC105081.1-201ENST00000617727 106 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 AL391516.1-201ENST00000554380 2449 ntBASIC1.63□□□□□ -2.15
TRAIPQ9BWF2 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 MIR206-201ENST00000384872 86 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 RNU1-119P-201ENST00000391122 165 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 AC015818.7-201ENST00000428754 109 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 AC087499.7-201ENST00000441958 109 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 RPL39P34-201ENST00000477141 156 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 MIR4679-2-201ENST00000578358 77 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 ZNF209P-201ENST00000593450 2304 ntBASIC1.62□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 MIR1912-201ENST00000410389 80 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 TRMT112P2-201ENST00000512910 132 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 MIR4661-201ENST00000582720 75 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 AC020891.4-201ENST00000605745 93 ntBASIC1.61□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.155-201ENST00000363632 101 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.273-201ENST00000364703 102 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.309-201ENST00000365046 111 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 SNORD115-35-201ENST00000365122 82 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
TRAIPQ9BWF2 Y_RNA.49-201ENST00000362714 112 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 SNORA63.5-201ENST00000363548 123 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 RNU7-48P-201ENST00000458875 63 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 MIR1270-201ENST00000459320 83 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 MIR4804-201ENST00000581683 73 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.59□□□□□ -2.15
TRAIPQ9BWF2 MIR337-201ENST00000362281 93 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 RNU4-67P-201ENST00000364569 141 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.291-201ENST00000364886 113 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAIPQ9BWF2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-409P-201ENST00000384114 104 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 SNORD105-201ENST00000386910 85 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-816P-201ENST00000390914 107 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.629-201ENST00000411368 105 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNU6-521P-201ENST00000516663 105 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 MIR4491-201ENST00000581087 68 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 AL162726.3-218ENST00000636401 95 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 U6.109-201ENST00000636749 87 ntBASIC1.57□□□□□ -2.16
TRAIPQ9BWF2 RNA5SP133-201ENST00000363368 119 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 SNORA7.5-201ENST00000410672 110 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 AL512310.12-203ENST00000640543 90 ntBASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAIPQ9BWF2 RNU6-363P-201ENST00000362895 105 ntBASIC1.55□□□□□ -2.16
TRAIPQ9BWF2 RNU4-58P-201ENST00000363192 141 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms