Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 U8.6-201ENST00000364939 135 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 SNORA32-201ENST00000384072 121 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 MIR599-201ENST00000385069 95 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 RNU7-74P-201ENST00000459104 62 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 RNU6-453P-201ENST00000516819 85 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 RNU6-570P-201ENST00000517051 105 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 MIR655-201ENST00000362159 97 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 SNORD114-10-201ENST00000363409 72 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 MT-TQ-201ENST00000387372 72 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 SNORD67.1-201ENST00000516618 108 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 RNU7-137P-201ENST00000516788 62 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 SNORA40.15-201ENST00000516884 107 ntBASIC-0.66□□□□□ -2.52
UPK3BQ9BT76 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 RNA5SP205-201ENST00000364653 136 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 RNU6-728P-201ENST00000365375 104 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 RNU6-480P-201ENST00000384332 107 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 RNU6-121P-201ENST00000410525 99 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 AC138393.2-201ENST00000414742 246 ntBASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.67□□□□□ -2.52
UPK3BQ9BT76 SNORD115-2-201ENST00000362842 82 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 SNORD115-20-201ENST00000365099 82 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 RNY1P6-201ENST00000384193 109 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 MIR1252-201ENST00000408861 65 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 RNA5SP144-201ENST00000410846 116 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 RNU4-63P-201ENST00000411313 118 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 AC097635.1-201ENST00000450678 155 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 snoU13.19-201ENST00000459148 104 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 AC082651.2-201ENST00000496833 166 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 TRAJ51-201ENST00000504127 63 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 SCARNA15-202ENST00000516881 127 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 AL590491.3-201ENST00000610731 82 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 uc_338.10-201ENST00000621872 182 ntBASIC-0.68□□□□□ -2.52
UPK3BQ9BT76 SNORD114-11-201ENST00000363738 75 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 SNORD116-25-201ENST00000516517 92 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 MIR4500-201ENST00000579472 76 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 MIR3920-201ENST00000581751 86 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 AC006504.6-201ENST00000590142 199 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.69□□□□□ -2.52
UPK3BQ9BT76 RNU6-770P-201ENST00000363929 105 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 SNORA25.7-201ENST00000364375 127 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 RNY4P3-201ENST00000365254 95 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 RNU6-823P-201ENST00000391042 103 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 RNU6-101P-201ENST00000410323 104 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 HAR1A.1-201ENST00000459583 118 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 RNU6-561P-201ENST00000516222 102 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 RNU7-13P-201ENST00000516413 62 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.7□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 RNU1-141P-201ENST00000364623 158 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 FGF7P4-201ENST00000509595 295 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 SERF1AP1-201ENST00000514575 187 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 RNY3P15-201ENST00000516297 97 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 RNU7-188P-201ENST00000517063 64 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 AL359881.1-201ENST00000602916 267 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 AC090971.5-201ENST00000621102 293 ntBASIC-0.71□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 RNU6-450P-201ENST00000364654 107 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 MIR181B2-201ENST00000385004 89 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 RNU4-43P-201ENST00000410628 137 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 MIR3681-201ENST00000580089 72 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 MIR4432-201ENST00000581823 84 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 AC093783.1-201ENST00000612976 329 ntBASIC-0.72□□□□□ -2.52
UPK3BQ9BT76 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 MIR624-201ENST00000385217 97 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 MIR548I2-201ENST00000408348 149 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 RNA5SP66-201ENST00000517178 101 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 MIR548AE2-201ENST00000583456 67 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 MIR4473-201ENST00000583731 91 ntBASIC-0.73□□□□□ -2.53
UPK3BQ9BT76 SNORD114-29-201ENST00000364819 70 ntBASIC-0.74□□□□□ -2.53
UPK3BQ9BT76 RNU6-138P-201ENST00000515952 107 ntBASIC-0.74□□□□□ -2.53
UPK3BQ9BT76 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.74□□□□□ -2.53
UPK3BQ9BT76 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.74□□□□□ -2.53
UPK3BQ9BT76 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms