Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 MIR590-201ENST00000385008 97 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 SNORD12-201ENST00000391002 90 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 RPS29P28-201ENST00000446439 141 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 snoU13.23-201ENST00000458863 104 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 SNORD79.1-201ENST00000516069 84 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 RNU6-537P-201ENST00000517277 103 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 AC036111.3-201ENST00000526389 112 ntBASIC1.45□□□□□ -2.18
FOXRED1Q96CU9 RNA5SP89-201ENST00000410300 108 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 AL353813.1-201ENST00000440700 253 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 SCARNA23-201ENST00000516060 130 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 Y_RNA.677-201ENST00000516401 85 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 AC106800.4-201ENST00000614905 153 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 AP001362.1-201ENST00000625165 124 ntBASIC1.44□□□□□ -2.18
FOXRED1Q96CU9 SNORD38.1-201ENST00000363863 68 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 SNORD45B-201ENST00000364617 72 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 RNY1P2-201ENST00000364820 117 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 U8.15-201ENST00000390947 134 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 SNORD93-201ENST00000408813 74 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 SNORA19.1-201ENST00000410656 129 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 MIR502-201ENST00000606349 86 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 MIR2052-201ENST00000636055 55 ntBASIC1.43□□□□□ -2.18
FOXRED1Q96CU9 RNU6-934P-201ENST00000365154 107 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 MIR34C-201ENST00000384831 77 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 SNORA40.13-201ENST00000516379 120 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 SNORA25.15-201ENST00000516487 89 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 AC023827.1-201ENST00000569247 97 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 MIR8081-201ENST00000611533 95 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 uc_338.6-201ENST00000613544 171 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 MIR376B-201ENST00000614515 100 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 AP001318.4-201ENST00000616637 121 ntBASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FOXRED1Q96CU9 Y_RNA.93-201ENST00000363066 109 ntBASIC1.41□□□□□ -2.18
FOXRED1Q96CU9 RNU6-53P-201ENST00000365367 106 ntBASIC1.41□□□□□ -2.18
FOXRED1Q96CU9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.41□□□□□ -2.18
FOXRED1Q96CU9 MIR1257-201ENST00000408490 117 ntBASIC1.41□□□□□ -2.18
FOXRED1Q96CU9 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
FOXRED1Q96CU9 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
FOXRED1Q96CU9 AC008163.1-202ENST00000636004 2889 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 AC023934.1-201ENST00000574529 2389 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.96-201ENST00000363092 109 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.107-201ENST00000363190 121 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 RNU6-994P-201ENST00000410507 111 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 UBL5P1-201ENST00000507979 193 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 RNU6-158P-201ENST00000517104 100 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 MIR4524B-201ENST00000581569 115 ntBASIC1.4□□□□□ -2.19
FOXRED1Q96CU9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 RNU1-36P-201ENST00000365130 165 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 SNORD83.1-201ENST00000411362 77 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 RNU7-185P-201ENST00000459215 60 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 RNU6-109P-201ENST00000516364 107 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 RNU6-184P-201ENST00000516514 107 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.694-201ENST00000516677 117 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 MIR4439-201ENST00000583746 80 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 U6.109-201ENST00000636749 87 ntBASIC1.39□□□□□ -2.19
FOXRED1Q96CU9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 RNA5SP133-201ENST00000363368 119 ntBASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 AC067940.1-201ENST00000458411 300 ntBASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 MTND5P40-201ENST00000559945 246 ntBASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 AC138749.4-201ENST00000563970 127 ntBASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 RNU6-90P-201ENST00000606352 106 ntBASIC1.38□□□□□ -2.19
FOXRED1Q96CU9 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 SPINT5P-201ENST00000448174 155 ntBASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 RNU6-1006P-201ENST00000516998 103 ntBASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 MIR4771-2-201ENST00000577758 74 ntBASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 MIR4771-1-201ENST00000582617 74 ntBASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
FOXRED1Q96CU9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 RNU6-170P-201ENST00000362832 104 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.95-201ENST00000363079 95 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 RNU6-403P-201ENST00000363163 104 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 RNA5SP190-201ENST00000365222 118 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.348-201ENST00000365403 103 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 RNU6-482P-201ENST00000391068 107 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 MIR548G-201ENST00000408442 89 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 RNU4-83P-201ENST00000410863 133 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 AC096949.1-201ENST00000412047 152 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 RPS26P5-201ENST00000418544 335 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 AC004941.2-201ENST00000427009 228 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 snoU13.21-201ENST00000459368 105 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 AC015712.3-201ENST00000559380 164 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 MIR4491-201ENST00000581087 68 ntBASIC1.36□□□□□ -2.19
FOXRED1Q96CU9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms