Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.18□□□□□ -2.38
SKA1Q96BD8 SNORA25.16-201ENST00000516741 121 ntBASIC0.18□□□□□ -2.38
SKA1Q96BD8 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
SKA1Q96BD8 Y_RNA.171-201ENST00000363760 102 ntBASIC0.17□□□□□ -2.38
SKA1Q96BD8 Y_RNA.280-201ENST00000364765 112 ntBASIC0.17□□□□□ -2.38
SKA1Q96BD8 Y_RNA.668-201ENST00000516233 93 ntBASIC0.17□□□□□ -2.38
SKA1Q96BD8 MIR4639-201ENST00000584938 69 ntBASIC0.17□□□□□ -2.38
SKA1Q96BD8 AC091304.10-201ENST00000641554 121 ntBASIC0.17□□□□□ -2.38
SKA1Q96BD8 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 RNU4-58P-201ENST00000363192 141 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 SUMO1P3-201ENST00000439961 304 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 RNA5SP33-201ENST00000516687 98 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 RNU6-1258P-201ENST00000516911 111 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 RNU7-35P-201ENST00000517174 62 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 MTND5P34-201ENST00000568888 325 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 MIR6828-201ENST00000636181 60 ntBASIC0.16□□□□□ -2.38
SKA1Q96BD8 Y_RNA.412-201ENST00000384001 104 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 RNU6-327P-201ENST00000516270 127 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 RNA5SP47-201ENST00000517230 109 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 AC062037.2-201ENST00000610137 73 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 U6.106-201ENST00000636360 105 ntBASIC0.15□□□□□ -2.39
SKA1Q96BD8 Y_RNA.52-201ENST00000362760 96 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 Y_RNA.133-201ENST00000363428 110 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 RNU6-694P-201ENST00000364071 147 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 SNORD28-201ENST00000384706 75 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 MIRLET7F2-201ENST00000385277 83 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 MIR2909-201ENST00000617113 69 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.14□□□□□ -2.39
SKA1Q96BD8 SNORD115-2-201ENST00000362842 82 ntBASIC0.13□□□□□ -2.39
SKA1Q96BD8 SNORD115-20-201ENST00000365099 82 ntBASIC0.13□□□□□ -2.39
SKA1Q96BD8 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
SKA1Q96BD8 MIR3128-201ENST00000581957 66 ntBASIC0.13□□□□□ -2.39
SKA1Q96BD8 MIR7107-201ENST00000611489 80 ntBASIC0.13□□□□□ -2.39
SKA1Q96BD8 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 RNA5SP133-201ENST00000363368 119 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 SNORA20.1-201ENST00000364790 130 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 RNU6-690P-201ENST00000365242 106 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 MTATP6P21-201ENST00000440681 189 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 AC011603.4-201ENST00000611325 277 ntBASIC0.12□□□□□ -2.39
SKA1Q96BD8 MIR101-2-201ENST00000362195 79 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 RNU6-1336P-201ENST00000383886 109 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 Y_RNA.435-201ENST00000384095 112 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 Y_RNA.470-201ENST00000384307 117 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 AC069271.1-201ENST00000445577 156 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 AC107027.2-201ENST00000512197 115 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 RNU6-1023P-201ENST00000516137 106 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 RNU6-531P-201ENST00000516694 104 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
SKA1Q96BD8 RNU6-818P-201ENST00000364837 108 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 AL118496.2-201ENST00000448300 230 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 RNU6-848P-201ENST00000515948 107 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 RNU6-617P-201ENST00000516147 107 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 RNU6-473P-201ENST00000516164 107 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 U4.1-201ENST00000620349 87 ntBASIC0.1□□□□□ -2.39
SKA1Q96BD8 Y_RNA.120-201ENST00000363304 110 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 SNORA32-201ENST00000384072 121 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 MIR568-201ENST00000385036 95 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 RNU6-918P-201ENST00000391219 106 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 RNA5SP236-201ENST00000516169 116 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 RNU6-1045P-201ENST00000516321 107 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 AC098479.1-201ENST00000609225 154 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 AC244669.1-204ENST00000621564 178 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 U6.109-201ENST00000636749 87 ntBASIC0.09□□□□□ -2.4
SKA1Q96BD8 RNU6-312P-201ENST00000364629 107 ntBASIC0.08□□□□□ -2.4
SKA1Q96BD8 Y_RNA.337-201ENST00000365312 102 ntBASIC0.08□□□□□ -2.4
SKA1Q96BD8 RNU6-768P-201ENST00000384683 107 ntBASIC0.08□□□□□ -2.4
SKA1Q96BD8 MIR4305-201ENST00000583252 102 ntBASIC0.08□□□□□ -2.4
SKA1Q96BD8 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 RNU6-1020P-201ENST00000363684 107 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 Y_RNA.200-201ENST00000364018 102 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 Y_RNA.531-201ENST00000384589 121 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 RNU6-111P-201ENST00000517179 105 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 TUG1_4.1-201ENST00000619464 181 ntBASIC0.07□□□□□ -2.4
SKA1Q96BD8 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
SKA1Q96BD8 Y_RNA.60-201ENST00000362831 98 ntBASIC0.06□□□□□ -2.4
SKA1Q96BD8 Y_RNA.83-201ENST00000363005 113 ntBASIC0.06□□□□□ -2.4
SKA1Q96BD8 Y_RNA.162-201ENST00000363683 102 ntBASIC0.06□□□□□ -2.4
SKA1Q96BD8 SNORA75.5-201ENST00000391291 81 ntBASIC0.06□□□□□ -2.4
SKA1Q96BD8 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
SKA1Q96BD8 SNORD114-10-201ENST00000363409 72 ntBASIC0.05□□□□□ -2.4
SKA1Q96BD8 RNU6-702P-201ENST00000364982 107 ntBASIC0.05□□□□□ -2.4
SKA1Q96BD8 Y_RNA.357-201ENST00000365487 109 ntBASIC0.05□□□□□ -2.4
SKA1Q96BD8 Y_RNA.433-201ENST00000384089 102 ntBASIC0.05□□□□□ -2.4
SKA1Q96BD8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
SKA1Q96BD8 RNU7-137P-201ENST00000516788 62 ntBASIC0.05□□□□□ -2.4
SKA1Q96BD8 MIR548AE2-201ENST00000583456 67 ntBASIC0.05□□□□□ -2.4
SKA1Q96BD8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.04□□□□□ -2.4
SKA1Q96BD8 RNU6-1082P-201ENST00000364574 107 ntBASIC0.04□□□□□ -2.4
SKA1Q96BD8 SNORD67.1-201ENST00000516618 108 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 292.4 ms