Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TMEM40Q8WWA1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TMEM40Q8WWA1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 RNU6-161P-201ENST00000363051 106 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 Y_RNA.340-201ENST00000365330 92 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 AC019129.1-201ENST00000403786 261 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 AL161935.2-201ENST00000414627 60 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 RNU6-295P-201ENST00000516901 104 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TMEM40Q8WWA1 SNORA63.2-201ENST00000362603 126 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 RNU6-1108P-201ENST00000516308 104 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 RNU6-1015P-201ENST00000517121 99 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 MIR4713-201ENST00000582691 75 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 MIR4484-201ENST00000582855 83 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 MIR8066-201ENST00000617280 78 ntBASIC2.21□□□□□ -2.06
TMEM40Q8WWA1 AL161722.3-201ENST00000605789 2983 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 RNU6-686P-201ENST00000364839 107 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 RNU6-411P-201ENST00000384451 107 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 AC125388.1-201ENST00000459631 156 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 MIR4796-201ENST00000580742 81 ntBASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TMEM40Q8WWA1 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 HSBP1P2-201ENST00000299671 229 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 Y_RNA.532-201ENST00000384590 113 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 MIR520C-201ENST00000385005 87 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 RNU6-482P-201ENST00000391068 107 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AL603825.1-201ENST00000438481 80 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AC027119.1-201ENST00000440877 241 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AC023790.1-201ENST00000482174 347 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 RNU6-557P-201ENST00000516842 110 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 MIR548AO-201ENST00000579992 96 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 MIR5089-201ENST00000580047 84 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 MIR4764-201ENST00000580680 88 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AC090897.1-201ENST00000580909 226 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AC008133.2-201ENST00000624540 351 ntBASIC2.19□□□□□ -2.06
TMEM40Q8WWA1 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 MIR653-201ENST00000385279 96 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 RNA5SP292-201ENST00000390974 118 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 SNORA26.9-201ENST00000391322 122 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 MIR1265-201ENST00000408444 86 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 RNA5SP233-201ENST00000459153 113 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 RPS29P11-201ENST00000496507 171 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 RNA5SP445-201ENST00000515889 115 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 AC133485.1-201ENST00000567176 124 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 MIR664A-201ENST00000626086 82 ntBASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TMEM40Q8WWA1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TMEM40Q8WWA1 AC005908.1-201ENST00000468701 347 ntBASIC2.17□□□□□ -2.06
TMEM40Q8WWA1 RNU6-448P-201ENST00000517052 107 ntBASIC2.17□□□□□ -2.06
TMEM40Q8WWA1 CYP3A52P-201ENST00000563326 91 ntBASIC2.17□□□□□ -2.06
TMEM40Q8WWA1 AC141846.1-201ENST00000568348 142 ntBASIC2.17□□□□□ -2.06
TMEM40Q8WWA1 MIR4500-201ENST00000579472 76 ntBASIC2.17□□□□□ -2.06
TMEM40Q8WWA1 MIR635-201ENST00000384830 98 ntBASIC2.16□□□□□ -2.06
TMEM40Q8WWA1 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
TMEM40Q8WWA1 RNU6-70P-201ENST00000516438 60 ntBASIC2.16□□□□□ -2.06
TMEM40Q8WWA1 RNU6-548P-201ENST00000517083 115 ntBASIC2.16□□□□□ -2.06
TMEM40Q8WWA1 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
TMEM40Q8WWA1 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
TMEM40Q8WWA1 RNU6-687P-201ENST00000516443 89 ntBASIC2.15□□□□□ -2.07
TMEM40Q8WWA1 RNU6-850P-201ENST00000516934 103 ntBASIC2.15□□□□□ -2.07
TMEM40Q8WWA1 AL512598.1-201ENST00000610158 273 ntBASIC2.15□□□□□ -2.07
TMEM40Q8WWA1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 Y_RNA.386-201ENST00000383913 105 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 RNU6-380P-201ENST00000410207 107 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 RNA5SP237-201ENST00000410414 113 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 BX276092.1-201ENST00000427368 251 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 SNRPGP12-201ENST00000449481 213 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 SNORD111.1-201ENST00000516421 86 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 SNORA18.5-201ENST00000516616 101 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 RNU6-922P-201ENST00000516753 99 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 AC015688.6-201ENST00000577737 104 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 AP000753.3-201ENST00000604083 169 ntBASIC2.14□□□□□ -2.07
TMEM40Q8WWA1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 RNY1P2-201ENST00000364820 117 ntBASIC2.13□□□□□ -2.07
TMEM40Q8WWA1 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms