Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC132825.6-201ENST00000638861 357 ntBASIC-1.84□□□□□ -2.7
CCDC171Q6TFL3 MIR124-2-201ENST00000385081 109 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 RNU6-780P-201ENST00000391030 104 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 MIR5591-201ENST00000578248 65 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 MIR548AE2-201ENST00000583456 67 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 AC133104.2-201ENST00000615272 193 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.85□□□□□ -2.71
CCDC171Q6TFL3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 MIR582-201ENST00000365731 98 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 AC097639.2-201ENST00000603159 172 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 AL050303.3-201ENST00000613704 284 ntBASIC-1.86□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 MIR8485-201ENST00000401372 91 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 RPS3AP52-201ENST00000435639 297 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 RNU6-264P-201ENST00000517134 104 ntBASIC-1.87□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 SNORD63-201ENST00000384262 68 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR516A2-201ENST00000384888 90 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR516A1-201ENST00000385033 90 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR628-201ENST00000385229 95 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR526A2-201ENST00000390198 65 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-956P-201ENST00000458868 103 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-507P-201ENST00000516045 100 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU6-911P-201ENST00000516523 104 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 MIR5688-201ENST00000580619 83 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 AC007485.1-201ENST00000616755 206 ntBASIC-1.88□□□□□ -2.71
CCDC171Q6TFL3 RNU4-10P-201ENST00000364383 140 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU6-937P-201ENST00000384325 106 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MIR548E-201ENST00000408287 88 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU6-588P-201ENST00000410281 105 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU6-373P-201ENST00000411247 98 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 AC019235.1-201ENST00000503847 207 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MRPS35P2-201ENST00000508242 191 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 U4.2-201ENST00000618561 85 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MIR1246-201ENST00000636535 73 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 MTND5P26-201ENST00000426018 1752 ntBASIC-1.89□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 MIR548K-201ENST00000408406 116 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 PMCHL1-202ENST00000423102 261 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 AP001362.1-201ENST00000625165 124 ntBASIC-1.9□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 SEPT14P8-201ENST00000508026 178 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 SCARNA15-202ENST00000516881 127 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 MIR4770-201ENST00000579149 58 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 AC138305.3-201ENST00000624988 240 ntBASIC-1.91□□□□□ -2.71
CCDC171Q6TFL3 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR206-201ENST00000384872 86 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR548F5-201ENST00000408421 86 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 AC096644.2-201ENST00000429278 159 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR1270-201ENST00000459320 83 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 AC107027.2-201ENST00000512197 115 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 C8orf59P2-201ENST00000603441 271 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 MIR6129-201ENST00000616087 109 ntBASIC-1.91□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 RNU6-850P-201ENST00000516934 103 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 AC245505.1-201ENST00000556398 224 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 AC119751.7-201ENST00000600494 245 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 AC006006.1-201ENST00000603082 144 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 MIR548O2-201ENST00000616090 70 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 MIR1321-201ENST00000637766 79 ntBASIC-1.92□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.93□□□□□ -2.72
CCDC171Q6TFL3 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.93□□□□□ -2.72
CCDC171Q6TFL3 RNY1P6-201ENST00000384193 109 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms