Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 RNU6-807P-201ENST00000516805 107 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP481-201ENST00000516814 122 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 uc_338.6-201ENST00000613544 171 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 RNU6-957P-201ENST00000363652 99 ntBASIC2.5□□□□□ -2.01
FOXR1Q6PIV2 RNU6-800P-201ENST00000384473 103 ntBASIC2.5□□□□□ -2.01
FOXR1Q6PIV2 HMGN2P39-201ENST00000398005 273 ntBASIC2.5□□□□□ -2.01
FOXR1Q6PIV2 MIR1302-7-201ENST00000408841 72 ntBASIC2.5□□□□□ -2.01
FOXR1Q6PIV2 AP000942.3-201ENST00000603702 160 ntBASIC2.5□□□□□ -2.01
FOXR1Q6PIV2 MIR30D-201ENST00000362283 70 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 RNU5F-1-201ENST00000362507 117 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 MIR563-201ENST00000385080 79 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 RNU6-1254P-201ENST00000391266 104 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 SNORA3.2-201ENST00000408221 125 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 AC015818.7-201ENST00000428754 109 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 RNU6-303P-201ENST00000517091 106 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 MIR3192-201ENST00000584920 77 ntBASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
FOXR1Q6PIV2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 Y_RNA.12-201ENST00000362393 112 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 RNU6-1241P-201ENST00000384536 107 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 MIR504-201ENST00000385065 83 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 U8.13-201ENST00000390842 128 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 RNU2-59P-201ENST00000410482 191 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP338-201ENST00000410495 85 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP100-201ENST00000410903 110 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP59-201ENST00000410922 110 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 U6.111-201ENST00000636093 83 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 MIR1297-201ENST00000637311 77 ntBASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXR1Q6PIV2 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 AC104435.1-201ENST00000483483 166 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP320-201ENST00000516263 124 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 SNORA31.17-201ENST00000516953 127 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 MIR4524B-201ENST00000581569 115 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.47□□□□□ -2.01
FOXR1Q6PIV2 SNORA25.3-201ENST00000363205 127 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 MIR653-201ENST00000385279 96 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 RNU6-243P-201ENST00000391140 107 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 RNU4-53P-201ENST00000410828 140 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 AC245517.4-201ENST00000448601 281 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 DEFB122-202ENST00000569013 197 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 SNORA4-201ENST00000584302 138 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 AL449363.1-201ENST00000617815 186 ntBASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXR1Q6PIV2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 MIR518E-201ENST00000385252 88 ntBASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 RNU6-205P-201ENST00000390858 107 ntBASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 HMGN2P38-201ENST00000423806 265 ntBASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 RNU6-531P-201ENST00000516694 104 ntBASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 SNORD92-201ENST00000585078 85 ntBASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 ZNF209P-201ENST00000593450 2304 ntBASIC2.45□□□□□ -2.02
FOXR1Q6PIV2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 Y_RNA.264-201ENST00000364665 102 ntBASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 SNORA67.4-201ENST00000384688 142 ntBASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 MIR2113-201ENST00000459007 91 ntBASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 SNORA25.16-201ENST00000516741 121 ntBASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
FOXR1Q6PIV2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR9-2-201ENST00000384838 87 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR194-1-201ENST00000384892 85 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR548U-201ENST00000390728 81 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 RNU6-663P-201ENST00000391105 106 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 AL606490.4-201ENST00000423117 127 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 snoU13.25-201ENST00000458945 104 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 RNU7-156P-201ENST00000517214 74 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR4769-201ENST00000584126 77 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 AL096861.1-201ENST00000610899 123 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXR1Q6PIV2 MIR154-201ENST00000385243 84 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 SNORD41-201ENST00000386967 70 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 RNU6-466P-201ENST00000391224 103 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 SNORD63B-201ENST00000411005 70 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 YWHAEP2-201ENST00000580066 112 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 YWHAEP3-201ENST00000582767 121 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 MIR4448-201ENST00000584360 86 ntBASIC2.42□□□□□ -2.02
FOXR1Q6PIV2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.41□□□□□ -2.02
FOXR1Q6PIV2 SNORA8.1-201ENST00000384250 140 ntBASIC2.41□□□□□ -2.02
FOXR1Q6PIV2 AC004965.1-201ENST00000413033 213 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms