Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR4446-201ENST00000578505 67 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 AC010297.1-201ENST00000623948 149 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 SNORD36A-201ENST00000362874 73 ntBASIC2.83□□□□□ -1.96
RC3H1Q5TC82 RNU1-148P-201ENST00000384472 162 ntBASIC2.83□□□□□ -1.96
RC3H1Q5TC82 RNU6-587P-201ENST00000391282 106 ntBASIC2.83□□□□□ -1.96
RC3H1Q5TC82 BX276092.1-201ENST00000427368 251 ntBASIC2.83□□□□□ -1.96
RC3H1Q5TC82 RNA5SP137-201ENST00000516833 135 ntBASIC2.83□□□□□ -1.96
RC3H1Q5TC82 AL357312.1-201ENST00000603879 298 ntBASIC2.83□□□□□ -1.96
RC3H1Q5TC82 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.83□□□□□ -1.96
RC3H1Q5TC82 RNA5SP465-201ENST00000391195 109 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 RNU6-303P-201ENST00000517091 106 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 MIR3064-201ENST00000581130 66 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 AC104996.3-201ENST00000590718 94 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 MIR664A-201ENST00000626086 82 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 U6.109-201ENST00000636749 87 ntBASIC2.82□□□□□ -1.96
RC3H1Q5TC82 RNU6-208P-201ENST00000362431 107 ntBASIC2.81□□□□□ -1.96
RC3H1Q5TC82 RNU6-132P-201ENST00000383863 107 ntBASIC2.81□□□□□ -1.96
RC3H1Q5TC82 HMGN2P39-201ENST00000398005 273 ntBASIC2.81□□□□□ -1.96
RC3H1Q5TC82 AC074348.1-201ENST00000426503 132 ntBASIC2.81□□□□□ -1.96
RC3H1Q5TC82 RNA5SP445-201ENST00000515889 115 ntBASIC2.81□□□□□ -1.96
RC3H1Q5TC82 RNU6-75P-201ENST00000515944 104 ntBASIC2.81□□□□□ -1.96
RC3H1Q5TC82 Y_RNA.119-201ENST00000363301 96 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 RNU1-52P-201ENST00000384190 164 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 Y_RNA.491-201ENST00000384417 107 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 RNU6-800P-201ENST00000384473 103 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 RNU6-540P-201ENST00000384622 101 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RC3H1Q5TC82 RNU6-1254P-201ENST00000391266 104 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 SNORD30.1-201ENST00000391309 70 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 AC244023.1-201ENST00000426884 112 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 snoU13.2-201ENST00000459201 104 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 RNU6-295P-201ENST00000516901 104 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 AC242498.1-201ENST00000604134 111 ntBASIC2.8□□□□□ -1.96
RC3H1Q5TC82 Y_RNA.283-201ENST00000364798 112 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 MIR548U-201ENST00000390728 81 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 AC015818.7-201ENST00000428754 109 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 RNU7-41P-201ENST00000515917 61 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 SNORA31.15-201ENST00000516771 132 ntBASIC2.79□□□□□ -1.96
RC3H1Q5TC82 MIR516A2-201ENST00000384888 90 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 MIR518A2-201ENST00000384966 87 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 MIR516A1-201ENST00000385033 90 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RC3H1Q5TC82 RNU6-243P-201ENST00000391140 107 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 Y_RNA.596-201ENST00000410462 109 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 RNA5SP501-201ENST00000410990 112 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 AC009474.2-201ENST00000451383 136 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 SNORD92-201ENST00000585078 85 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 U6.111-201ENST00000636093 83 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RC3H1Q5TC82 AL161722.3-201ENST00000605789 2983 ntBASIC2.78□□□□□ -1.96
RC3H1Q5TC82 MIR6132-201ENST00000622083 109 ntBASIC2.77□□□□□ -1.97
RC3H1Q5TC82 MIR588-201ENST00000384900 83 ntBASIC2.76□□□□□ -1.97
RC3H1Q5TC82 SNORA48.3-201ENST00000391081 134 ntBASIC2.76□□□□□ -1.97
RC3H1Q5TC82 RNA5SP82-201ENST00000516707 92 ntBASIC2.76□□□□□ -1.97
RC3H1Q5TC82 AC121758.2-201ENST00000553271 193 ntBASIC2.76□□□□□ -1.97
RC3H1Q5TC82 AL096861.1-201ENST00000610899 123 ntBASIC2.76□□□□□ -1.97
RC3H1Q5TC82 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.76□□□□□ -1.97
RC3H1Q5TC82 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.76□□□□□ -1.97
RC3H1Q5TC82 MIR563-201ENST00000385080 79 ntBASIC2.75□□□□□ -1.97
RC3H1Q5TC82 AP000942.3-201ENST00000603702 160 ntBASIC2.75□□□□□ -1.97
RC3H1Q5TC82 PRELID3BP2-201ENST00000605362 201 ntBASIC2.75□□□□□ -1.97
RC3H1Q5TC82 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RC3H1Q5TC82 Y_RNA.12-201ENST00000362393 112 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 RNU6-471P-201ENST00000383944 106 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 RNU6-1241P-201ENST00000384536 107 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 RNU6-466P-201ENST00000391224 103 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 YWHAEP2-201ENST00000580066 112 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 YWHAEP3-201ENST00000582767 121 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 SNORA4-201ENST00000584302 138 ntBASIC2.74□□□□□ -1.97
RC3H1Q5TC82 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RC3H1Q5TC82 RNU6-1123P-201ENST00000362347 106 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 MIR653-201ENST00000385279 96 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 AC245517.4-201ENST00000448601 281 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 RNU6-322P-201ENST00000516010 103 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 MIR6845-201ENST00000613182 61 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 AC245884.12-201ENST00000615364 59 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.73□□□□□ -1.97
RC3H1Q5TC82 MIRLET7F1-201ENST00000362202 87 ntBASIC2.72□□□□□ -1.97
RC3H1Q5TC82 MIR154-201ENST00000385243 84 ntBASIC2.72□□□□□ -1.97
RC3H1Q5TC82 MIR518E-201ENST00000385252 88 ntBASIC2.72□□□□□ -1.97
RC3H1Q5TC82 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RC3H1Q5TC82 SNORD90-201ENST00000391145 111 ntBASIC2.72□□□□□ -1.97
RC3H1Q5TC82 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RC3H1Q5TC82 SNORA6-201ENST00000384033 151 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 RNU6-987P-201ENST00000384759 104 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 RNU6-663P-201ENST00000391105 106 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RC3H1Q5TC82 RNU7-106P-201ENST00000459514 67 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 RNA5SP182-201ENST00000516064 82 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
RC3H1Q5TC82 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.71□□□□□ -1.98
RC3H1Q5TC82 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 256.5 ms