Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNU6-764P-201ENST00000516396 105 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 RNA5SP153-201ENST00000516498 76 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 SNORD67.1-201ENST00000516618 108 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 MIR3129-201ENST00000581095 76 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 VN1R91P-201ENST00000594377 169 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 SNORD113-5-201ENST00000607261 78 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 MIR1246-201ENST00000636535 73 ntBASIC-1.18□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 SNORA32-201ENST00000384072 121 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 MTND3P8-201ENST00000412909 339 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 RNU7-113P-201ENST00000459273 62 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 SERF1AP1-201ENST00000514575 187 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 AC006006.1-201ENST00000603082 144 ntBASIC-1.19□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 RNU6-524P-201ENST00000384270 107 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 MIR519E-201ENST00000385075 84 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 SNORD18.2-201ENST00000459604 70 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 RNU6-415P-201ENST00000516252 97 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 MIR5688-201ENST00000580619 83 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 AL121655.1-201ENST00000605811 308 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 AC133104.2-201ENST00000615272 193 ntBASIC-1.2□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 MIR526A2-201ENST00000390198 65 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 MIR548I2-201ENST00000408348 149 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC099799.1-201ENST00000439809 192 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC244090.1-201ENST00000441884 93 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 RNU7-195P-201ENST00000458793 62 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC021146.9-201ENST00000512503 156 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC145423.2-201ENST00000610631 239 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC093783.1-201ENST00000612976 329 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 MIR6854-201ENST00000614935 69 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 RNY4P27-201ENST00000363341 96 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC093423.1-201ENST00000440817 142 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 MRPS35P2-201ENST00000508242 191 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 RNU6-507P-201ENST00000516045 100 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 SNORA40.17-201ENST00000517256 115 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 MIR4770-201ENST00000579149 58 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 RPS29P30-201ENST00000600975 111 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 C8orf59P2-201ENST00000603441 271 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC011603.4-201ENST00000611325 277 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC007485.1-201ENST00000616755 206 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 AC138305.3-201ENST00000624988 240 ntBASIC-1.21□□□□□ -2.6
RFX7Q2KHR2 SNORD74.6-201ENST00000364796 70 ntBASIC-1.22□□□□□ -2.61
RFX7Q2KHR2 MIR519A1-201ENST00000385257 85 ntBASIC-1.22□□□□□ -2.61
RFX7Q2KHR2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.61
RFX7Q2KHR2 U4.1-201ENST00000620349 87 ntBASIC-1.22□□□□□ -2.61
RFX7Q2KHR2 SNORD115-25-201ENST00000362619 82 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 RNU6-484P-201ENST00000384016 107 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 AL353813.1-201ENST00000440700 253 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 AL442663.2-201ENST00000554385 511 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 MIR5690-201ENST00000583739 73 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 AC006504.6-201ENST00000590142 199 ntBASIC-1.23□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 RNU6-973P-201ENST00000364690 107 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 MIR527-201ENST00000385244 85 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 RNU2-51P-201ENST00000410708 197 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 SNORD63B-201ENST00000411005 70 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 PMCHL1-202ENST00000423102 261 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 AC107027.2-201ENST00000512197 115 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 AL359881.1-201ENST00000602916 267 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.24□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.25□□□□□ -2.61
RFX7Q2KHR2 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.25□□□□□ -2.61
RFX7Q2KHR2 RNY4P14-201ENST00000363656 96 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms