Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 RNY1P13-201ENST00000365030 105 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 RNY1P6-201ENST00000384193 109 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 RNU6-804P-201ENST00000384286 107 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 SNORA18-201ENST00000384416 132 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 Y_RNA.552-201ENST00000384665 112 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 MIR573-201ENST00000384964 99 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 MIR140-201ENST00000385282 100 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 RNU6-239P-201ENST00000390990 99 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 Y_RNA.588-201ENST00000391254 102 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
CSTF1Q05048 RNU7-80P-201ENST00000459562 61 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 AC107027.2-201ENST00000512197 115 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 RNA5SP272-201ENST00000516095 111 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 RNU6-240P-201ENST00000516098 97 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 AC022523.2-201ENST00000561045 150 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 AC141846.1-201ENST00000568348 142 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 AL359881.1-201ENST00000602916 267 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
CSTF1Q05048 Y_RNA.42-201ENST00000362660 108 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 Y_RNA.366-201ENST00000365540 102 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 Y_RNA.441-201ENST00000384123 112 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 Y_RNA.515-201ENST00000384535 112 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 MIR125B2-201ENST00000385128 89 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 MT-TI-201ENST00000387365 69 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 RNU6-679P-201ENST00000391003 106 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 RNU6-1307P-201ENST00000391012 103 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 RNU6-460P-201ENST00000391158 108 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.4□□□□□ -2.35
CSTF1Q05048 MIR6086-201ENST00000638065 55 ntBASIC0.4□□□□□ -2.35
CSTF1Q05048 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
CSTF1Q05048 RNU4-11P-201ENST00000365287 132 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 RNU6-1318P-201ENST00000365389 103 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 Y_RNA.398-201ENST00000383952 99 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 SNORA32-201ENST00000384072 121 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 Y_RNA.785-201ENST00000384290 109 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 RNU6-1104P-201ENST00000384723 104 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 RNU6-394P-201ENST00000410735 107 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 RNU7-156P-201ENST00000517214 74 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 MIR3612-201ENST00000579753 87 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 SNORD92-201ENST00000585078 85 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 MIR6844-201ENST00000637122 62 ntBASIC0.39□□□□□ -2.35
CSTF1Q05048 MIR18A-201ENST00000362310 71 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 Y_RNA.8-201ENST00000362353 102 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 Y_RNA.13-201ENST00000362403 112 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 Y_RNA.29-201ENST00000362570 113 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 Y_RNA.120-201ENST00000363304 110 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 RNU4-67P-201ENST00000364569 141 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 Y_RNA.337-201ENST00000365312 102 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 Y_RNA.454-201ENST00000384224 113 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 SNORA20-201ENST00000384662 132 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CSTF1Q05048 SNORA75.5-201ENST00000391291 81 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 MIR938-201ENST00000401216 83 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 MIR18B-201ENST00000454574 71 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 RNU7-123P-201ENST00000515911 60 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 RNU7-35P-201ENST00000517174 62 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 MTND5P34-201ENST00000568888 325 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 AC090897.1-201ENST00000580909 226 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 MIR4491-201ENST00000581087 68 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 MIR548AE2-201ENST00000583456 67 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 FTX_2.1-201ENST00000618816 94 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 AC021753.1-201ENST00000635724 168 ntBASIC0.38□□□□□ -2.35
CSTF1Q05048 RNU6-151P-201ENST00000364158 107 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 SNORD116-18-201ENST00000383961 92 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 MIR1257-201ENST00000408490 117 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 Y_RNA.662-201ENST00000516028 97 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 MIR4305-201ENST00000583252 102 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 DNAJC19P2-201ENST00000593340 302 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.37□□□□□ -2.35
CSTF1Q05048 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 RNU6-690P-201ENST00000365242 106 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 RNU6-949P-201ENST00000384040 107 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 MIR644A-201ENST00000385262 94 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 MT-TF-201ENST00000387314 71 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 SNORD100-201ENST00000408573 76 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 SNORD93-201ENST00000408813 74 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 RNU4-83P-201ENST00000410863 133 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 AC002350.1-201ENST00000490759 375 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 RNU7-79P-201ENST00000516082 62 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 SNORD67.1-201ENST00000516618 108 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 AC112693.2-201ENST00000556538 232 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.36□□□□□ -2.35
CSTF1Q05048 RNU6-403P-201ENST00000363163 104 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 RNA5SP245-201ENST00000364239 121 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 Y_RNA.357-201ENST00000365487 109 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 RNU6-886P-201ENST00000384319 105 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 AL603914.1-201ENST00000401964 204 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
CSTF1Q05048 SNORA25.12-201ENST00000516202 82 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 Y_RNA.690-201ENST00000516603 95 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 RNU7-70P-201ENST00000516941 66 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 AC133485.4-201ENST00000561835 220 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 MIR3646-201ENST00000578301 84 ntBASIC0.35□□□□□ -2.35
CSTF1Q05048 MIR3144-201ENST00000579460 79 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms