Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-168P-201ENST00000516189 101 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 AL160004.2-201ENST00000432935 350 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.38□□□□□ -2.63
PRKDCP78527 SNORD36A-201ENST00000362874 73 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 RNU4-88P-201ENST00000411220 86 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 AL161932.1-201ENST00000437408 146 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 AC024067.1-201ENST00000426199 223 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 AL158211.2-201ENST00000607282 395 ntBASIC-1.38□□□□□ -2.63
PRKDCP78527 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU6-931P-201ENST00000363850 107 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 SNORD61-201ENST00000384252 73 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.39□□□□□ -2.63
PRKDCP78527 MIR4748-201ENST00000578076 82 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU6-626P-201ENST00000363354 107 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNA5SP144-201ENST00000410846 116 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 MTATP6P19-201ENST00000413797 659 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU7-187P-201ENST00000458985 68 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 RNU6-719P-201ENST00000516671 104 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 MIR376A2-201ENST00000636782 80 ntBASIC-1.39□□□□□ -2.63
PRKDCP78527 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 MTND3P7-201ENST00000474435 343 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 RNU6-841P-201ENST00000383872 107 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 MTND4P28-201ENST00000426217 387 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 SNORD42A-201ENST00000459584 64 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 AC087741.2-201ENST00000619415 172 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 RNU6-996P-201ENST00000365438 107 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 RNU6-20P-201ENST00000384106 107 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 AC108081.1-201ENST00000604358 221 ntBASIC-1.4□□□□□ -2.63
PRKDCP78527 RNU6-746P-201ENST00000384112 109 ntBASIC-1.41□□□□□ -2.63
PRKDCP78527 SNORD78.2-201ENST00000391076 69 ntBASIC-1.41□□□□□ -2.63
PRKDCP78527 AL590004.1-201ENST00000405321 300 ntBASIC-1.41□□□□□ -2.63
PRKDCP78527 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.41□□□□□ -2.63
PRKDCP78527 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.41□□□□□ -2.63
PRKDCP78527 AC144568.1-201ENST00000520139 137 ntBASIC-1.41□□□□□ -2.63
PRKDCP78527 AC068339.1-201ENST00000526965 141 ntBASIC-1.41□□□□□ -2.63
PRKDCP78527 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 AL021368.1-201ENST00000607490 540 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 AP001362.1-201ENST00000625165 124 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 MIR516A2-201ENST00000384888 90 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 MIR516A1-201ENST00000385033 90 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 U3.27-201ENST00000391237 200 ntBASIC-1.41□□□□□ -2.64
PRKDCP78527 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 MIR582-201ENST00000365731 98 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 MIR3145-201ENST00000580727 82 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 SNORA72.4-201ENST00000384174 132 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 RNU6-195P-201ENST00000411352 109 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 MIR2113-201ENST00000459007 91 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 AP000240.1-201ENST00000609910 452 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 MIR3123-201ENST00000583417 75 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 MIR6874-201ENST00000635894 71 ntBASIC-1.42□□□□□ -2.64
PRKDCP78527 SNORD115-19-201ENST00000363098 82 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 SNORD115-18-201ENST00000363293 82 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 SNORD115-17-201ENST00000364612 82 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 RNU6-235P-201ENST00000362644 107 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 RNU4-24P-201ENST00000364565 139 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 RNU6-636P-201ENST00000384598 107 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.43□□□□□ -2.64
PRKDCP78527 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.43□□□□□ -2.64
PRKDCP78527 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 RNU7-195P-201ENST00000458793 62 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 MIR548AE2-201ENST00000583456 67 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 RNU6-842P-201ENST00000384269 107 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 AC083904.1-201ENST00000487828 231 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 MRPS36P3-201ENST00000519284 130 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 MIR4424-201ENST00000585257 86 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 MIR3942-201ENST00000585264 109 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 AC011476.5-201ENST00000615594 130 ntBASIC-1.44□□□□□ -2.64
PRKDCP78527 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 snoU109.3-201ENST00000459477 145 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 MIR4790-201ENST00000577799 79 ntBASIC-1.45□□□□□ -2.64
PRKDCP78527 MIR5692C2-201ENST00000577959 77 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 265.2 ms