Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RNU6-1006P-201ENST00000516998 103 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 MIR376B-201ENST00000614515 100 ntBASIC1.8□□□□□ -2.12
NKX3-2P78367 Y_RNA.95-201ENST00000363079 95 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 SNORD45B-201ENST00000364617 72 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 RNY1P13-201ENST00000365030 105 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 Y_RNA.448-201ENST00000384185 108 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 MRPL35P3-201ENST00000421557 364 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 SNORD53B-201ENST00000577887 78 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 AL357312.1-201ENST00000603879 298 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 U7.3-201ENST00000616123 62 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 MIR7111-201ENST00000619751 72 ntBASIC1.79□□□□□ -2.12
NKX3-2P78367 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.79□□□□□ -2.12
NKX3-2P78367 MIR302D-201ENST00000362275 68 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 Y_RNA.388-201ENST00000383919 113 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 MIR517C-201ENST00000385103 95 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 MIR1302-4-201ENST00000408701 150 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 AC141846.1-201ENST00000568348 142 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.78□□□□□ -2.12
NKX3-2P78367 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.78□□□□□ -2.12
NKX3-2P78367 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
NKX3-2P78367 SNORD114-10-201ENST00000363409 72 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 SNORA25.9-201ENST00000365087 128 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 RNY4P29-201ENST00000410801 97 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 AC109327.2-201ENST00000448339 378 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 AC019176.1-201ENST00000518519 225 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 AC026421.1-201ENST00000519101 163 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 AL662814.1-201ENST00000617364 121 ntBASIC1.77□□□□□ -2.13
NKX3-2P78367 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NKX3-2P78367 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NKX3-2P78367 SNORD1A-201ENST00000364968 72 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 Y_RNA.327-201ENST00000365201 102 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 MIR1276-201ENST00000408707 83 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 RNA5SP237-201ENST00000410414 113 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 AC027119.1-201ENST00000440877 241 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 snoU13.2-201ENST00000459201 104 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 AC096720.1-201ENST00000604441 183 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 AC062037.1-201ENST00000605302 128 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 BX248123.2-201ENST00000606318 124 ntBASIC1.76□□□□□ -2.13
NKX3-2P78367 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
NKX3-2P78367 SNORA26.2-201ENST00000390922 122 ntBASIC1.75□□□□□ -2.13
NKX3-2P78367 RPS29P28-201ENST00000446439 141 ntBASIC1.75□□□□□ -2.13
NKX3-2P78367 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
NKX3-2P78367 SEPT14P17-201ENST00000617978 177 ntBASIC1.75□□□□□ -2.13
NKX3-2P78367 MIR6740-201ENST00000618268 113 ntBASIC1.75□□□□□ -2.13
NKX3-2P78367 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
NKX3-2P78367 Y_RNA.190-201ENST00000363964 101 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 RNU6-865P-201ENST00000364772 107 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 RNU6-396P-201ENST00000365369 105 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 Y_RNA.508-201ENST00000384502 114 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 MIR1185-1-201ENST00000408598 86 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX3-2P78367 AP003716.2-201ENST00000528260 108 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.74□□□□□ -2.13
NKX3-2P78367 SNORD38.1-201ENST00000363863 68 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU6-1163P-201ENST00000364516 107 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU6-1134P-201ENST00000365156 101 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU6-205P-201ENST00000390858 107 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU7-48P-201ENST00000458875 63 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 SNORA44.1-201ENST00000517031 108 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 RNU6-86P-201ENST00000606534 107 ntBASIC1.73□□□□□ -2.13
NKX3-2P78367 SNORA7.1-201ENST00000363750 139 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 MIR563-201ENST00000385080 79 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 RPL39P39-201ENST00000455840 151 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 AL133373.1-201ENST00000497098 94 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 AC079140.2-201ENST00000506193 142 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 Y_RNA.705-201ENST00000516862 110 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 uc_338.6-201ENST00000613544 171 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 MIR6516-201ENST00000630554 81 ntBASIC1.72□□□□□ -2.13
NKX3-2P78367 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 RNU6-949P-201ENST00000384040 107 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 Y_RNA.593-201ENST00000410292 98 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 RNU6-887P-201ENST00000410660 100 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 RNU6-165P-201ENST00000517170 99 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
NKX3-2P78367 Y_RNA.98-201ENST00000363109 102 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNA5SP264-201ENST00000363115 107 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-654P-201ENST00000364373 107 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-813P-201ENST00000384691 107 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 MIR518E-201ENST00000385252 88 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 U8.15-201ENST00000390947 134 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-447P-201ENST00000410293 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNA5SP95-201ENST00000410319 137 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-1118P-201ENST00000410382 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-1076P-201ENST00000410397 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-355P-201ENST00000410427 104 ntBASIC1.7□□□□□ -2.14
NKX3-2P78367 RNU6-791P-201ENST00000410467 104 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms