Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.64□□□□□ -2.15
HERVK_113P62684 MIR6516-201ENST00000630554 81 ntBASIC1.64□□□□□ -2.15
HERVK_113P62684 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HERVK_113P62684 MIR7-2-201ENST00000384970 110 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 RNA5SP95-201ENST00000410319 137 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 snoU13.2-201ENST00000459201 104 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 AC048334.1-201ENST00000477975 159 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 RNU6-537P-201ENST00000517277 103 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 MIR4264-201ENST00000583520 66 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 AC105081.1-201ENST00000617727 106 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 AL512310.12-203ENST00000640543 90 ntBASIC1.63□□□□□ -2.15
HERVK_113P62684 RNU6-654P-201ENST00000364373 107 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 MIR206-201ENST00000384872 86 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 MIR590-201ENST00000385008 97 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 RNU7-62P-201ENST00000458856 62 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 RNU7-2P-201ENST00000516096 62 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 AP003716.2-201ENST00000528260 108 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 AC141846.1-201ENST00000568348 142 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 AL662814.1-201ENST00000617364 121 ntBASIC1.62□□□□□ -2.15
HERVK_113P62684 RNU4-36P-201ENST00000364294 144 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 SNORD115-35-201ENST00000365122 82 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 Y_RNA.330-201ENST00000365230 109 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 Y_RNA.360-201ENST00000365512 102 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 RNU6-679P-201ENST00000391003 106 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 RNU11-2P-201ENST00000516898 142 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 RNU6-902P-201ENST00000517212 91 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 DEFB131E-201ENST00000532329 154 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 MIR6740-201ENST00000618268 113 ntBASIC1.61□□□□□ -2.15
HERVK_113P62684 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HERVK_113P62684 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 RNY1P13-201ENST00000365030 105 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 SNORA31.2-201ENST00000516019 134 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 RNU6-109P-201ENST00000516364 107 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 Y_RNA.677-201ENST00000516401 85 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 RNU6-184P-201ENST00000516514 107 ntBASIC1.6□□□□□ -2.15
HERVK_113P62684 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
HERVK_113P62684 Y_RNA.448-201ENST00000384185 108 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 MIR577-201ENST00000385196 96 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 RNU7-137P-201ENST00000516788 62 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 MIR4694-201ENST00000578534 80 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 MIR4452-201ENST00000583004 71 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 SNORA4-201ENST00000584302 138 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
HERVK_113P62684 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HERVK_113P62684 RNY3P2-201ENST00000362918 102 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 RNU6-865P-201ENST00000364772 107 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 MT-TN-201ENST00000387400 73 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 RNU6-1307P-201ENST00000391012 103 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 RNU6-1165P-201ENST00000410119 107 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 RNU6-613P-201ENST00000410412 108 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
HERVK_113P62684 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.58□□□□□ -2.16
HERVK_113P62684 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
HERVK_113P62684 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HERVK_113P62684 Y_RNA.78-201ENST00000362970 110 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 RNU6-832P-201ENST00000363319 107 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 SNORD114-10-201ENST00000363409 72 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 RNU6-1099P-201ENST00000363533 107 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 SNORA2B-201ENST00000384583 137 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 Y_RNA.544-201ENST00000384650 113 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 AL353813.1-201ENST00000440700 253 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 RNU6-904P-201ENST00000516206 101 ntBASIC1.57□□□□□ -2.16
HERVK_113P62684 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
HERVK_113P62684 RNU6-1321P-201ENST00000390905 107 ntBASIC1.56□□□□□ -2.16
HERVK_113P62684 AC004223.1-201ENST00000479840 271 ntBASIC1.56□□□□□ -2.16
HERVK_113P62684 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.56□□□□□ -2.16
HERVK_113P62684 SEPT14P17-201ENST00000617978 177 ntBASIC1.56□□□□□ -2.16
HERVK_113P62684 SNORD114-22-201ENST00000365423 72 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 RNU6-949P-201ENST00000384040 107 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 RNU6-1201P-201ENST00000384227 107 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 Y_RNA.659-201ENST00000515994 113 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 RNU6-1018P-201ENST00000516577 106 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 AC133485.1-201ENST00000567176 124 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 uc_338.6-201ENST00000613544 171 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 AP001318.4-201ENST00000616637 121 ntBASIC1.55□□□□□ -2.16
HERVK_113P62684 Y_RNA.10-201ENST00000362371 110 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 RNU6-1313P-201ENST00000362622 102 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 MIR563-201ENST00000385080 79 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 RPS29P28-201ENST00000446439 141 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 SCARNA23-201ENST00000516060 130 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 Y_RNA.818-201ENST00000618813 71 ntBASIC1.54□□□□□ -2.16
HERVK_113P62684 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.54□□□□□ -2.16
HERVK_113P62684 MIR377-201ENST00000362145 69 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 MIR30D-201ENST00000362283 70 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 MIR96-201ENST00000362288 78 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 Y_RNA.540-201ENST00000384638 111 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 MIR34C-201ENST00000384831 77 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 RNU6-910P-201ENST00000390844 107 ntBASIC1.53□□□□□ -2.16
HERVK_113P62684 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms