Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 MIR548F4-201ENST00000408515 105 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 DEFB131E-201ENST00000532329 154 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.07□□□□□ -2.42
SRP54P61011 RNA5SP133-201ENST00000363368 119 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 RNU6-643P-201ENST00000384018 107 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 MIR643-201ENST00000385267 97 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 RNU2-4P-201ENST00000606190 192 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.08□□□□□ -2.42
SRP54P61011 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 SNORD115-2-201ENST00000362842 82 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 RNU6-702P-201ENST00000364982 107 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 SNORD115-20-201ENST00000365099 82 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SRP54P61011 MIR548H3-201ENST00000408771 118 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 RPL39P34-201ENST00000477141 156 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 RNU7-129P-201ENST00000516128 62 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 AC138749.4-201ENST00000563970 127 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 AL359881.1-201ENST00000602916 267 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 U6.109-201ENST00000636749 87 ntBASIC-0.09□□□□□ -2.42
SRP54P61011 RNY4P28-201ENST00000365281 93 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 MIR145-201ENST00000384967 88 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 RNU6-493P-201ENST00000391321 108 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 AL022718.1-201ENST00000412004 84 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 AC244505.6-201ENST00000452829 130 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 RNU7-113P-201ENST00000459273 62 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 MTND1P19-201ENST00000511780 315 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 RNA5SP236-201ENST00000516169 116 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 AC141557.1-201ENST00000540982 400 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 MIR4308-201ENST00000580634 81 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.1□□□□□ -2.43
SRP54P61011 AC006504.6-201ENST00000590142 199 ntBASIC-0.1□□□□□ -2.43
SRP54P61011 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.11□□□□□ -2.43
SRP54P61011 RNU6-726P-201ENST00000364680 107 ntBASIC-0.11□□□□□ -2.43
SRP54P61011 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.11□□□□□ -2.43
SRP54P61011 RNU2-38P-201ENST00000410856 79 ntBASIC-0.11□□□□□ -2.43
SRP54P61011 RNU7-137P-201ENST00000516788 62 ntBASIC-0.11□□□□□ -2.43
SRP54P61011 MIR4305-201ENST00000583252 102 ntBASIC-0.11□□□□□ -2.43
SRP54P61011 MIR101-2-201ENST00000362195 79 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 RNU6-756P-201ENST00000383997 107 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 SNORA32-201ENST00000384072 121 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 MIR593-201ENST00000384856 100 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.12□□□□□ -2.43
SRP54P61011 MIR1270-201ENST00000459320 83 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 SNORD67.1-201ENST00000516618 108 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 RNA5SP33-201ENST00000516687 98 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 RNU7-161P-201ENST00000517289 62 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 AC098479.1-201ENST00000609225 154 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 AL162376.1-201ENST00000624117 175 ntBASIC-0.12□□□□□ -2.43
SRP54P61011 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 RNU6-161P-201ENST00000363051 106 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 SNORD115-24-201ENST00000363528 82 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 RNY1P2-201ENST00000364820 117 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 MIR501-201ENST00000390204 84 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 RNU6-782P-201ENST00000516852 104 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 MIR548AE2-201ENST00000583456 67 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 SNORA70.25-201ENST00000612741 95 ntBASIC-0.13□□□□□ -2.43
SRP54P61011 RNU6-923P-201ENST00000364753 107 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 RNU6-275P-201ENST00000364910 107 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 SNORD127-201ENST00000458892 86 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 RNU2-35P-201ENST00000516446 142 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
SRP54P61011 AL360085.1-201ENST00000604713 532 ntBASIC-0.14□□□□□ -2.43
SRP54P61011 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.15□□□□□ -2.43
SRP54P61011 SNORD58.1-201ENST00000391313 66 ntBASIC-0.15□□□□□ -2.43
SRP54P61011 AL117187.1-201ENST00000555482 181 ntBASIC-0.15□□□□□ -2.43
SRP54P61011 AC138869.1-201ENST00000568623 124 ntBASIC-0.15□□□□□ -2.43
SRP54P61011 AC105081.1-201ENST00000617727 106 ntBASIC-0.15□□□□□ -2.43
SRP54P61011 SNORD114-10-201ENST00000363409 72 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 RNA5SP403-201ENST00000363598 108 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 MIR329-2-201ENST00000385029 84 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 MTND2P23-201ENST00000422990 651 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 RNA5SP285-201ENST00000516619 119 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 U6.106-201ENST00000636360 105 ntBASIC-0.16□□□□□ -2.44
SRP54P61011 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
SRP54P61011 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.17□□□□□ -2.44
SRP54P61011 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 226.8 ms