Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU7-73P-201ENST00000458743 63 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 RNU7-113P-201ENST00000459273 62 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 AC055731.1-201ENST00000474387 401 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.97□□□□□ -2.25
COL4A4P53420 RNU2-13P-201ENST00000515909 113 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 RNA5SP168-201ENST00000516642 112 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 RNA5SP33-201ENST00000516687 98 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 MIR3126-201ENST00000577443 74 ntBASIC0.97□□□□□ -2.25
COL4A4P53420 SNORD58A-201ENST00000383875 65 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 SNORA24-201ENST00000384096 131 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 Y_RNA.537-201ENST00000384626 109 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 SNORA26.6-201ENST00000391256 115 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 RNA5SP193-201ENST00000410353 107 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 AC244636.1-201ENST00000421152 228 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 AC069257.2-201ENST00000441819 155 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 SNORA31.10-201ENST00000516482 106 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 RNU7-193P-201ENST00000516723 65 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 RNU6-158P-201ENST00000517104 100 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 AP003327.1-201ENST00000529684 127 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 AC022523.2-201ENST00000561045 150 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 MIR5094-201ENST00000578766 85 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 MALAT1.1-201ENST00000618249 95 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.96□□□□□ -2.26
COL4A4P53420 AL512310.12-203ENST00000640543 90 ntBASIC0.96□□□□□ -2.26
COL4A4P53420 Y_RNA.107-201ENST00000363190 121 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 MIR802-201ENST00000390235 94 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 MIR676-201ENST00000390702 67 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNU6-816P-201ENST00000390914 107 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 U8.15-201ENST00000390947 134 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNA5SP109-201ENST00000391010 116 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNU6-1268P-201ENST00000391214 107 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNU6-1239P-201ENST00000391310 107 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 MIR1283-2-201ENST00000408621 87 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNU4-69P-201ENST00000410677 143 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNA5SP144-201ENST00000410846 116 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A4P53420 RNU7-67P-201ENST00000459003 62 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 MIR1270-201ENST00000459320 83 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNA5SP57-201ENST00000459463 123 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 AC141557.1-201ENST00000540982 400 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 AC021613.1-201ENST00000623880 111 ntBASIC0.95□□□□□ -2.26
COL4A4P53420 RNU6-1163P-201ENST00000364516 107 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 U8.5-201ENST00000364528 136 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU6-979P-201ENST00000383896 107 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 Y_RNA.470-201ENST00000384307 117 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 SNORA18-201ENST00000384416 132 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU6-644P-201ENST00000391155 98 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU6-602P-201ENST00000411155 105 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU1-98P-201ENST00000458992 160 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU6-521P-201ENST00000516663 105 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 MIR4791-201ENST00000607666 84 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 AC012531.4-201ENST00000616509 177 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 Y_RNA.17-201ENST00000362433 111 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 Y_RNA.171-201ENST00000363760 102 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 SNORD45B-201ENST00000364617 72 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU4-16P-201ENST00000364737 141 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 Y_RNA.290-201ENST00000364879 114 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 RNU6-950P-201ENST00000384651 107 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 SNORD78.1-201ENST00000390866 65 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A4P53420 SNORD14A-201ENST00000606526 91 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 AL773524.1-201ENST00000614065 229 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 IGLL4P-201ENST00000614590 133 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 MIR1245B-201ENST00000636115 69 ntBASIC0.94□□□□□ -2.26
COL4A4P53420 MIR494-201ENST00000349529 81 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 RNU6-228P-201ENST00000362700 106 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 Y_RNA.313-201ENST00000365095 103 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 Y_RNA.342-201ENST00000365352 113 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 Y_RNA.430-201ENST00000384081 110 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 MIR516B2-201ENST00000385190 85 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 RNA5SP261-201ENST00000410536 106 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 MRPL35P3-201ENST00000421557 364 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 AC109327.2-201ENST00000448339 378 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 snoU13.16-201ENST00000459350 104 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 RNU7-96P-201ENST00000459535 64 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 RNU6-795P-201ENST00000516323 103 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 MIR4777-201ENST00000583710 86 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 AC021506.2-201ENST00000612354 169 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 U7.3-201ENST00000616123 62 ntBASIC0.93□□□□□ -2.26
COL4A4P53420 Y_RNA.96-201ENST00000363092 109 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 Y_RNA.467-201ENST00000384297 102 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 RNU6-972P-201ENST00000391208 107 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 AL034345.1-201ENST00000407768 123 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 RNU6-887P-201ENST00000410660 100 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 RNU7-35P-201ENST00000517174 62 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 MIR4711-201ENST00000578274 70 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 MIR4694-201ENST00000578534 80 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 AC069114.2-201ENST00000604699 304 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 RNU6-86P-201ENST00000606534 107 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 AC015726.2-201ENST00000620112 122 ntBASIC0.92□□□□□ -2.26
COL4A4P53420 RNU6-170P-201ENST00000362832 104 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 SNORD115-3-201ENST00000363100 82 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 Y_RNA.219-201ENST00000364232 113 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 SNORA1.1-201ENST00000364671 133 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 RNU6-1124P-201ENST00000384169 107 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 RNU6-1031P-201ENST00000384773 107 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A4P53420 AC093850.1-201ENST00000454121 251 ntBASIC0.91□□□□□ -2.26
COL4A4P53420 RNU7-171P-201ENST00000459581 62 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms