Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNA5SP450-201ENST00000411206 102 ntBASIC3□□□□□ -1.93
PRIM1P49642 RNU7-85P-201ENST00000458851 63 ntBASIC3□□□□□ -1.93
PRIM1P49642 MIR2115-201ENST00000516657 100 ntBASIC3□□□□□ -1.93
PRIM1P49642 RNA5SP402-201ENST00000517148 110 ntBASIC3□□□□□ -1.93
PRIM1P49642 MIR4658-201ENST00000584344 65 ntBASIC3□□□□□ -1.93
PRIM1P49642 FO624990.1-201ENST00000636373 85 ntBASIC3□□□□□ -1.93
PRIM1P49642 AC244023.1-201ENST00000426884 112 ntBASIC2.99□□□□□ -1.93
PRIM1P49642 SUMO1P4-201ENST00000429430 302 ntBASIC2.99□□□□□ -1.93
PRIM1P49642 RNA5SP458-201ENST00000516188 119 ntBASIC2.99□□□□□ -1.93
PRIM1P49642 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.99□□□□□ -1.93
PRIM1P49642 AC242498.1-201ENST00000604134 111 ntBASIC2.99□□□□□ -1.93
PRIM1P49642 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.99□□□□□ -1.93
PRIM1P49642 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRIM1P49642 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PRIM1P49642 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PRIM1P49642 RNU6-203P-201ENST00000384038 104 ntBASIC2.98□□□□□ -1.93
PRIM1P49642 RNU4-83P-201ENST00000410863 133 ntBASIC2.98□□□□□ -1.93
PRIM1P49642 MIR4446-201ENST00000578505 67 ntBASIC2.98□□□□□ -1.93
PRIM1P49642 SNORD92-201ENST00000585078 85 ntBASIC2.98□□□□□ -1.93
PRIM1P49642 PRELID3BP2-201ENST00000605362 201 ntBASIC2.98□□□□□ -1.93
PRIM1P49642 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PRIM1P49642 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRIM1P49642 MIR513A1-201ENST00000385138 129 ntBASIC2.97□□□□□ -1.93
PRIM1P49642 RNU6-466P-201ENST00000391224 103 ntBASIC2.97□□□□□ -1.93
PRIM1P49642 RNU6-539P-201ENST00000516665 103 ntBASIC2.97□□□□□ -1.93
PRIM1P49642 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PRIM1P49642 RNA5SP259-201ENST00000365541 109 ntBASIC2.96□□□□□ -1.94
PRIM1P49642 MIR221-201ENST00000385135 110 ntBASIC2.96□□□□□ -1.94
PRIM1P49642 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PRIM1P49642 JTBP1-201ENST00000441314 247 ntBASIC2.96□□□□□ -1.94
PRIM1P49642 HSPE1P24-201ENST00000450782 238 ntBASIC2.96□□□□□ -1.94
PRIM1P49642 AC023790.1-201ENST00000482174 347 ntBASIC2.96□□□□□ -1.94
PRIM1P49642 RNU11-2P-201ENST00000516898 142 ntBASIC2.96□□□□□ -1.94
PRIM1P49642 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRIM1P49642 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PRIM1P49642 RPL23AP42-201ENST00000471152 471 ntBASIC2.95□□□□□ -1.94
PRIM1P49642 SNORA31.25-201ENST00000517242 134 ntBASIC2.95□□□□□ -1.94
PRIM1P49642 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRIM1P49642 RNU6-1165P-201ENST00000410119 107 ntBASIC2.94□□□□□ -1.94
PRIM1P49642 RNA5SP247-201ENST00000411181 105 ntBASIC2.94□□□□□ -1.94
PRIM1P49642 AL161935.2-201ENST00000414627 60 ntBASIC2.94□□□□□ -1.94
PRIM1P49642 MIR219B-201ENST00000637023 88 ntBASIC2.94□□□□□ -1.94
PRIM1P49642 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRIM1P49642 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRIM1P49642 MIR377-201ENST00000362145 69 ntBASIC2.93□□□□□ -1.94
PRIM1P49642 SNORD36A-201ENST00000362874 73 ntBASIC2.93□□□□□ -1.94
PRIM1P49642 RNU4-58P-201ENST00000363192 141 ntBASIC2.93□□□□□ -1.94
PRIM1P49642 SNORD77.2-201ENST00000391045 68 ntBASIC2.93□□□□□ -1.94
PRIM1P49642 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRIM1P49642 MIR30D-201ENST00000362283 70 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 RNA5SP212-201ENST00000391223 107 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 BX276092.1-201ENST00000427368 251 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 AC245517.4-201ENST00000448601 281 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 Y_RNA.681-201ENST00000516445 113 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 RNU7-10P-201ENST00000607194 63 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 GHRLOS.1-201ENST00000610995 70 ntBASIC2.92□□□□□ -1.94
PRIM1P49642 MIR21-201ENST00000362134 72 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 U8.13-201ENST00000390842 128 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRIM1P49642 RNU7-62P-201ENST00000458856 62 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 RPL30P7-201ENST00000479312 323 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 RN7SL274P-201ENST00000492268 272 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 RNU6-1194P-201ENST00000516208 104 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 AC104996.3-201ENST00000590718 94 ntBASIC2.91□□□□□ -1.94
PRIM1P49642 RNU6-161P-201ENST00000363051 106 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 Y_RNA.283-201ENST00000364798 112 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 SNORD41-201ENST00000386967 70 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 AC004223.1-201ENST00000479840 271 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 RNA5SP445-201ENST00000515889 115 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 SNORA18.5-201ENST00000516616 101 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 MIR6740-201ENST00000618268 113 ntBASIC2.9□□□□□ -1.95
PRIM1P49642 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRIM1P49642 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRIM1P49642 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRIM1P49642 Y_RNA.164-201ENST00000363709 102 ntBASIC2.89□□□□□ -1.95
PRIM1P49642 RNU6-523P-201ENST00000516304 54 ntBASIC2.89□□□□□ -1.95
PRIM1P49642 SNORA31.11-201ENST00000516528 139 ntBASIC2.89□□□□□ -1.95
PRIM1P49642 RNU6-295P-201ENST00000516901 104 ntBASIC2.89□□□□□ -1.95
PRIM1P49642 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.89□□□□□ -1.95
PRIM1P49642 AP000942.3-201ENST00000603702 160 ntBASIC2.89□□□□□ -1.95
PRIM1P49642 AL049779.4-201ENST00000604500 156 ntBASIC2.89□□□□□ -1.95
PRIM1P49642 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PRIM1P49642 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PRIM1P49642 AL359851.1-201ENST00000569460 4997 ntBASIC2.88□□□□□ -1.95
PRIM1P49642 Y_RNA.338-201ENST00000365320 114 ntBASIC2.88□□□□□ -1.95
PRIM1P49642 Y_RNA.491-201ENST00000384417 107 ntBASIC2.88□□□□□ -1.95
PRIM1P49642 RNU6-250P-201ENST00000516958 103 ntBASIC2.88□□□□□ -1.95
PRIM1P49642 MIR3064-201ENST00000581130 66 ntBASIC2.88□□□□□ -1.95
PRIM1P49642 MIR6766-201ENST00000622641 72 ntBASIC2.88□□□□□ -1.95
PRIM1P49642 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PRIM1P49642 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PRIM1P49642 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PRIM1P49642 RNA5SP393-201ENST00000363423 117 ntBASIC2.87□□□□□ -1.95
PRIM1P49642 RNU1-52P-201ENST00000384190 164 ntBASIC2.87□□□□□ -1.95
PRIM1P49642 MIR18B-201ENST00000454574 71 ntBASIC2.87□□□□□ -1.95
PRIM1P49642 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.87□□□□□ -1.95
PRIM1P49642 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PRIM1P49642 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PRIM1P49642 MIR516A2-201ENST00000384888 90 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms