Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 snoU13.2-201ENST00000459201 104 ntBASIC1.75□□□□□ -2.13
SLC6A11P48066 RNU6-162P-201ENST00000516228 103 ntBASIC1.75□□□□□ -2.13
SLC6A11P48066 MIR2115-201ENST00000516657 100 ntBASIC1.75□□□□□ -2.13
SLC6A11P48066 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
SLC6A11P48066 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SLC6A11P48066 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
SLC6A11P48066 SNORD33-201ENST00000362761 85 ntBASIC1.74□□□□□ -2.13
SLC6A11P48066 Y_RNA.95-201ENST00000363079 95 ntBASIC1.74□□□□□ -2.13
SLC6A11P48066 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
SLC6A11P48066 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.74□□□□□ -2.13
SLC6A11P48066 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SLC6A11P48066 SNORA25.9-201ENST00000365087 128 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 Y_RNA.467-201ENST00000384297 102 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 Y_RNA.558-201ENST00000384685 113 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 MRPL35P3-201ENST00000421557 364 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 RNU7-62P-201ENST00000458856 62 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 RNU7-48P-201ENST00000458875 63 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 RPL30P7-201ENST00000479312 323 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 AL133373.1-201ENST00000497098 94 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
SLC6A11P48066 AC133485.1-201ENST00000567176 124 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 MIR4264-201ENST00000583520 66 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 MIR4777-201ENST00000583710 86 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 U7.3-201ENST00000616123 62 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 MIR6740-201ENST00000618268 113 ntBASIC1.73□□□□□ -2.13
SLC6A11P48066 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SLC6A11P48066 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SLC6A11P48066 Y_RNA.290-201ENST00000364879 114 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 MIR1185-1-201ENST00000408598 86 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 MIR1302-4-201ENST00000408701 150 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 RNA5SP95-201ENST00000410319 137 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 AP1B1P2-201ENST00000416196 106 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 AC109327.2-201ENST00000448339 378 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 RNU6-844P-201ENST00000517175 102 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 AL359821.1-201ENST00000605519 182 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 MIR6516-201ENST00000630554 81 ntBASIC1.72□□□□□ -2.13
SLC6A11P48066 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SLC6A11P48066 Y_RNA.98-201ENST00000363109 102 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNA5SP264-201ENST00000363115 107 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 SNORD38.1-201ENST00000363863 68 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-654P-201ENST00000364373 107 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 SNORD73B-201ENST00000364394 72 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-1134P-201ENST00000365156 101 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-447P-201ENST00000410293 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-1118P-201ENST00000410382 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-1076P-201ENST00000410397 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-355P-201ENST00000410427 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-791P-201ENST00000410467 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-705P-201ENST00000410601 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-1100P-201ENST00000410691 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-860P-201ENST00000410860 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-1217P-201ENST00000411276 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 RNU6-785P-201ENST00000411324 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 AC096949.1-201ENST00000412047 152 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 U6.90-201ENST00000614007 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 MIR8070-201ENST00000616510 88 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 U6.70-201ENST00000620287 104 ntBASIC1.71□□□□□ -2.14
SLC6A11P48066 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
SLC6A11P48066 Y_RNA.96-201ENST00000363092 109 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 RNU6-949P-201ENST00000384040 107 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 SNORA67.5-201ENST00000391036 107 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 RNU6-1165P-201ENST00000410119 107 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 SPINT5P-201ENST00000448174 155 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 Y_RNA.705-201ENST00000516862 110 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 RNU6-1006P-201ENST00000516998 103 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 MIR3664-201ENST00000579074 99 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 SNORA4-201ENST00000584302 138 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.7□□□□□ -2.14
SLC6A11P48066 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SLC6A11P48066 Y_RNA.355-201ENST00000365462 98 ntBASIC1.69□□□□□ -2.14
SLC6A11P48066 AC245517.4-201ENST00000448601 281 ntBASIC1.69□□□□□ -2.14
SLC6A11P48066 RNU6-165P-201ENST00000517170 99 ntBASIC1.69□□□□□ -2.14
SLC6A11P48066 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC6A11P48066 AL512310.8-201ENST00000550183 120 ntBASIC1.69□□□□□ -2.14
SLC6A11P48066 AL645939.4-201ENST00000604495 135 ntBASIC1.69□□□□□ -2.14
SLC6A11P48066 AP001362.1-201ENST00000625165 124 ntBASIC1.69□□□□□ -2.14
SLC6A11P48066 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SLC6A11P48066 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.68□□□□□ -2.14
SLC6A11P48066 SNORD38.2-201ENST00000384470 69 ntBASIC1.68□□□□□ -2.14
SLC6A11P48066 MT-TN-201ENST00000387400 73 ntBASIC1.68□□□□□ -2.14
SLC6A11P48066 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC6A11P48066 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.68□□□□□ -2.14
SLC6A11P48066 RNU6-762P-201ENST00000517107 102 ntBASIC1.68□□□□□ -2.14
SLC6A11P48066 MTND5P40-201ENST00000559945 246 ntBASIC1.68□□□□□ -2.14
SLC6A11P48066 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
SLC6A11P48066 RNU6-86P-201ENST00000606534 107 ntBASIC1.68□□□□□ -2.14
SLC6A11P48066 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SLC6A11P48066 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 MIR563-201ENST00000385080 79 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SLC6A11P48066 MIR548G-201ENST00000408442 89 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 RNU6-887P-201ENST00000410660 100 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
SLC6A11P48066 RNU11-2P-201ENST00000516898 142 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 269.1 ms