Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 RNU6-1335P-201ENST00000365426 107 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 SNORA19-201ENST00000384737 128 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HOXA13P31271 RNA5SP261-201ENST00000410536 106 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 RNU6-1333P-201ENST00000516162 93 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 SNORD33.1-201ENST00000516213 88 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 RNU6-659P-201ENST00000516454 104 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 AC141846.1-201ENST00000568348 142 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 MIR3152-201ENST00000579801 74 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 AL136317.1-201ENST00000612653 226 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 AL589743.1-201ENST00000551932 2712 ntBASIC0.9□□□□□ -2.27
HOXA13P31271 MIR1-1-201ENST00000362147 71 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 SNORD116-14-201ENST00000383894 92 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 SNORD116-17-201ENST00000383929 92 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 RNU6-80P-201ENST00000384195 107 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 SNORD116-15-201ENST00000384445 92 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 SNORD116-19-201ENST00000384729 92 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 RNA5SP436-201ENST00000516020 115 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 RNU6-406P-201ENST00000516470 107 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 AC020891.4-201ENST00000605745 93 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 AC132825.6-201ENST00000638861 357 ntBASIC0.89□□□□□ -2.27
HOXA13P31271 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
HOXA13P31271 SNORD115-2-201ENST00000362842 82 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 RNY1P13-201ENST00000365030 105 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 SNORD115-20-201ENST00000365099 82 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 MIR539-201ENST00000365690 78 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 Y_RNA.528-201ENST00000384575 108 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 RNU6-1307P-201ENST00000391012 103 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 U7.7-201ENST00000459276 60 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 MIR5000-201ENST00000577717 103 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 MIR4771-2-201ENST00000577758 74 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 MIR4771-1-201ENST00000582617 74 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 AC025166.1-201ENST00000612411 163 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 U2.22-201ENST00000636441 106 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 MIR3914-2-201ENST00000637339 95 ntBASIC0.88□□□□□ -2.27
HOXA13P31271 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
HOXA13P31271 MTND5P18-201ENST00000445624 1801 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 Y_RNA.127-201ENST00000363386 109 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 SNORD113-1-201ENST00000365321 69 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 RNA5SP237-201ENST00000410414 113 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 RNU7-35P-201ENST00000517174 62 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 AC023934.1-201ENST00000574529 2389 ntBASIC0.87□□□□□ -2.27
HOXA13P31271 U8.15-201ENST00000390947 134 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 SNORD67.1-201ENST00000516618 108 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 Y_RNA.712-201ENST00000517011 92 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 MIR4714-201ENST00000580728 77 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 Y_RNA.773-201ENST00000607168 90 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 AC087741.2-201ENST00000619415 172 ntBASIC0.86□□□□□ -2.27
HOXA13P31271 RNU6-934P-201ENST00000365154 107 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 RNU6-616P-201ENST00000384353 107 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 RNU6-22P-201ENST00000384355 107 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 RNU6-1086P-201ENST00000410930 100 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 MIR1255B1-201ENST00000636325 63 ntBASIC0.85□□□□□ -2.27
HOXA13P31271 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HOXA13P31271 SNORD99-201ENST00000408612 74 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 RNU4-69P-201ENST00000410677 143 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 AL606753.1-201ENST00000427435 87 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 RNU7-79P-201ENST00000516082 62 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 RNU7-6P-201ENST00000516845 62 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 AC105081.1-201ENST00000617727 106 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 AL035470.1-201ENST00000622571 220 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
HOXA13P31271 Y_RNA.198-201ENST00000364013 98 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 Y_RNA.344-201ENST00000365381 112 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 Y_RNA.353-201ENST00000365440 108 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 RNU6-949P-201ENST00000384040 107 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 RPS26P5-201ENST00000418544 335 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 RNU7-185P-201ENST00000459215 60 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 COX6CP6-201ENST00000490840 228 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 RNU7-137P-201ENST00000516788 62 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 MIR4676-201ENST00000583078 72 ntBASIC0.83□□□□□ -2.28
HOXA13P31271 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HOXA13P31271 Y_RNA.549-201ENST00000384657 102 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 RNU6-1168P-201ENST00000390831 104 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 Y_RNA.588-201ENST00000391254 102 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 RNA5SP136-201ENST00000410906 107 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 RNU6-893P-201ENST00000458841 100 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 RNU6-977P-201ENST00000516411 103 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 AC008608.1-201ENST00000603910 127 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms