Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 RNU6-275P-201ENST00000364910 107 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 SNORA2A-201ENST00000383885 135 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
IGHV3-43DP0DP04 SNORD115-2-201ENST00000362842 82 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 SNORD115-24-201ENST00000363528 82 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 RNA5SP325-201ENST00000363756 130 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 SNORD115-20-201ENST00000365099 82 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 RNU6-690P-201ENST00000365242 106 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 MIR548L-201ENST00000408303 86 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 MTND2P23-201ENST00000422990 651 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 RPL39P34-201ENST00000477141 156 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 SNORD67.1-201ENST00000516618 108 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 RNU7-137P-201ENST00000516788 62 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 AC138749.4-201ENST00000563970 127 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 AC098479.1-201ENST00000609225 154 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.08□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 SNORA63-201ENST00000363450 132 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 MIR193B-201ENST00000384907 83 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 MIR548AE2-201ENST00000583456 67 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
IGHV3-43DP0DP04 SNORD114-26-201ENST00000363543 72 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-702P-201ENST00000364982 107 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 RNA5SP236-201ENST00000516169 116 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 MIR4305-201ENST00000583252 102 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 U6.106-201ENST00000636360 105 ntBASIC-0.1□□□□□ -2.43
IGHV3-43DP0DP04 SNORD114-10-201ENST00000363409 72 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 MIR145-201ENST00000384967 88 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 AL358176.2-201ENST00000425769 204 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 AC244505.6-201ENST00000452829 130 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 AC138869.1-201ENST00000568623 124 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 AL359881.1-201ENST00000602916 267 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 RNU1-29P-201ENST00000606574 126 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 AC105081.1-201ENST00000617727 106 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.11□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-726P-201ENST00000364680 107 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-768P-201ENST00000384683 107 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 MIR489-201ENST00000384923 84 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 RNU7-104P-201ENST00000459398 79 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 MIR548H5-201ENST00000580314 60 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 AL360085.1-201ENST00000604713 532 ntBASIC-0.12□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 RNY1P2-201ENST00000364820 117 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-818P-201ENST00000364837 108 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 SNORD58.1-201ENST00000391313 66 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 MIR892B-201ENST00000401279 77 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 RNU2-35P-201ENST00000516446 142 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 AC011603.4-201ENST00000611325 277 ntBASIC-0.13□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-738P-201ENST00000384531 106 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-429P-201ENST00000384582 108 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 AC108059.2-201ENST00000434626 151 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-240P-201ENST00000516098 97 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-782P-201ENST00000516852 104 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 RNU7-161P-201ENST00000517289 62 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 AC138907.4-201ENST00000570107 226 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 MIR5190-201ENST00000581537 80 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 AC021443.1-201ENST00000604478 211 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 RNU7-10P-201ENST00000607194 63 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 AL162376.1-201ENST00000624117 175 ntBASIC-0.14□□□□□ -2.43
IGHV3-43DP0DP04 MIR330-201ENST00000362196 94 ntBASIC-0.15□□□□□ -2.43
IGHV3-43DP0DP04 RNU6-652P-201ENST00000365488 107 ntBASIC-0.15□□□□□ -2.43
IGHV3-43DP0DP04 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.15□□□□□ -2.43
IGHV3-43DP0DP04 MIR1197-201ENST00000408818 88 ntBASIC-0.15□□□□□ -2.43
IGHV3-43DP0DP04 MTATP6P21-201ENST00000440681 189 ntBASIC-0.15□□□□□ -2.43
IGHV3-43DP0DP04 AC107027.2-201ENST00000512197 115 ntBASIC-0.15□□□□□ -2.43
IGHV3-43DP0DP04 RNU4-71P-201ENST00000516258 113 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms