Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
VIMP08670 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
VIMP08670 AC091304.10-201ENST00000641554 121 ntBASIC0.13□□□□□ -2.39
VIMP08670 Y_RNA.83-201ENST00000363005 113 ntBASIC0.12□□□□□ -2.39
VIMP08670 Y_RNA.200-201ENST00000364018 102 ntBASIC0.12□□□□□ -2.39
VIMP08670 RNA5SP245-201ENST00000364239 121 ntBASIC0.12□□□□□ -2.39
VIMP08670 RNU6-818P-201ENST00000364837 108 ntBASIC0.12□□□□□ -2.39
VIMP08670 Y_RNA.307-201ENST00000365022 117 ntBASIC0.12□□□□□ -2.39
VIMP08670 AC107027.2-201ENST00000512197 115 ntBASIC0.12□□□□□ -2.39
VIMP08670 MIR548AE2-201ENST00000583456 67 ntBASIC0.12□□□□□ -2.39
VIMP08670 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
VIMP08670 RNU6-702P-201ENST00000364982 107 ntBASIC0.11□□□□□ -2.39
VIMP08670 RNA5SP193-201ENST00000410353 107 ntBASIC0.11□□□□□ -2.39
VIMP08670 MTND3P2-201ENST00000438452 342 ntBASIC0.11□□□□□ -2.39
VIMP08670 SNORD67.1-201ENST00000516618 108 ntBASIC0.11□□□□□ -2.39
VIMP08670 MIR4503-201ENST00000582187 83 ntBASIC0.11□□□□□ -2.39
VIMP08670 MIR4305-201ENST00000583252 102 ntBASIC0.11□□□□□ -2.39
VIMP08670 MIR3149-201ENST00000584629 83 ntBASIC0.11□□□□□ -2.39
VIMP08670 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.11□□□□□ -2.39
VIMP08670 SNORA63.5-201ENST00000363548 123 ntBASIC0.1□□□□□ -2.39
VIMP08670 RNU6-1020P-201ENST00000363684 107 ntBASIC0.1□□□□□ -2.39
VIMP08670 RNU6-312P-201ENST00000364629 107 ntBASIC0.1□□□□□ -2.39
VIMP08670 Y_RNA.366-201ENST00000365540 102 ntBASIC0.1□□□□□ -2.39
VIMP08670 Y_RNA.423-201ENST00000384057 113 ntBASIC0.1□□□□□ -2.39
VIMP08670 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
VIMP08670 Y_RNA.531-201ENST00000384589 121 ntBASIC0.1□□□□□ -2.39
VIMP08670 MIRLET7F2-201ENST00000385277 83 ntBASIC0.1□□□□□ -2.39
VIMP08670 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
VIMP08670 RNU2-35P-201ENST00000516446 142 ntBASIC0.1□□□□□ -2.39
VIMP08670 RNU7-137P-201ENST00000516788 62 ntBASIC0.1□□□□□ -2.39
VIMP08670 AC138749.4-201ENST00000563970 127 ntBASIC0.1□□□□□ -2.39
VIMP08670 TUG1_4.1-201ENST00000619464 181 ntBASIC0.1□□□□□ -2.39
VIMP08670 MIR101-2-201ENST00000362195 79 ntBASIC0.09□□□□□ -2.4
VIMP08670 Y_RNA.337-201ENST00000365312 102 ntBASIC0.09□□□□□ -2.4
VIMP08670 RNU6-196P-201ENST00000384315 107 ntBASIC0.09□□□□□ -2.4
VIMP08670 SNORA75.5-201ENST00000391291 81 ntBASIC0.09□□□□□ -2.4
VIMP08670 Y_RNA.793-201ENST00000411222 111 ntBASIC0.09□□□□□ -2.4
VIMP08670 RNU6-240P-201ENST00000516098 97 ntBASIC0.09□□□□□ -2.4
VIMP08670 RNU6-1219P-201ENST00000516143 112 ntBASIC0.09□□□□□ -2.4
VIMP08670 AL359881.1-201ENST00000602916 267 ntBASIC0.09□□□□□ -2.4
VIMP08670 AC011603.4-201ENST00000611325 277 ntBASIC0.09□□□□□ -2.4
VIMP08670 SNORA9.1-201ENST00000362412 131 ntBASIC0.08□□□□□ -2.4
VIMP08670 SNORD114-23-201ENST00000363536 72 ntBASIC0.08□□□□□ -2.4
VIMP08670 Y_RNA.357-201ENST00000365487 109 ntBASIC0.08□□□□□ -2.4
VIMP08670 Y_RNA.497-201ENST00000384447 98 ntBASIC0.08□□□□□ -2.4
VIMP08670 MTATP6P21-201ENST00000440681 189 ntBASIC0.08□□□□□ -2.4
VIMP08670 Y_RNA.676-201ENST00000516393 96 ntBASIC0.08□□□□□ -2.4
VIMP08670 AC105081.1-201ENST00000617727 106 ntBASIC0.08□□□□□ -2.4
VIMP08670 MIR6844-201ENST00000637122 62 ntBASIC0.08□□□□□ -2.4
VIMP08670 Y_RNA.119-201ENST00000363301 96 ntBASIC0.07□□□□□ -2.4
VIMP08670 Y_RNA.193-201ENST00000363979 102 ntBASIC0.07□□□□□ -2.4
VIMP08670 RNU6-1126P-201ENST00000384002 107 ntBASIC0.07□□□□□ -2.4
VIMP08670 RNU6-574P-201ENST00000384265 107 ntBASIC0.07□□□□□ -2.4
VIMP08670 PCNPP3-201ENST00000393579 471 ntBASIC0.07□□□□□ -2.4
VIMP08670 AC022559.1-201ENST00000520905 205 ntBASIC0.07□□□□□ -2.4
VIMP08670 AC138907.4-201ENST00000570107 226 ntBASIC0.07□□□□□ -2.4
VIMP08670 AC021443.1-201ENST00000604478 211 ntBASIC0.07□□□□□ -2.4
VIMP08670 Y_RNA.49-201ENST00000362714 112 ntBASIC0.06□□□□□ -2.4
VIMP08670 SNORD114-10-201ENST00000363409 72 ntBASIC0.06□□□□□ -2.4
VIMP08670 Y_RNA.233-201ENST00000364407 101 ntBASIC0.06□□□□□ -2.4
VIMP08670 Y_RNA.452-201ENST00000384202 108 ntBASIC0.06□□□□□ -2.4
VIMP08670 RNU6-588P-201ENST00000410281 105 ntBASIC0.06□□□□□ -2.4
VIMP08670 RNU2-60P-201ENST00000517290 128 ntBASIC0.06□□□□□ -2.4
VIMP08670 AC009779.6-201ENST00000603972 165 ntBASIC0.06□□□□□ -2.4
VIMP08670 AC098479.1-201ENST00000609225 154 ntBASIC0.06□□□□□ -2.4
VIMP08670 MIR924-201ENST00000638017 53 ntBASIC0.06□□□□□ -2.4
VIMP08670 Y_RNA.56-201ENST00000362798 112 ntBASIC0.05□□□□□ -2.4
VIMP08670 RNU7-164P-201ENST00000459221 62 ntBASIC0.05□□□□□ -2.4
VIMP08670 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
VIMP08670 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
VIMP08670 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
VIMP08670 RNU6-716P-201ENST00000365621 103 ntBASIC0.04□□□□□ -2.4
VIMP08670 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
VIMP08670 MIR518E-201ENST00000385252 88 ntBASIC0.04□□□□□ -2.4
VIMP08670 MIR1270-201ENST00000459320 83 ntBASIC0.04□□□□□ -2.4
VIMP08670 RNU7-129P-201ENST00000516128 62 ntBASIC0.04□□□□□ -2.4
VIMP08670 AC130289.1-201ENST00000577321 73 ntBASIC0.04□□□□□ -2.4
VIMP08670 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
VIMP08670 SNORD115-24-201ENST00000363528 82 ntBASIC0.03□□□□□ -2.4
VIMP08670 MIR760-201ENST00000390220 80 ntBASIC0.03□□□□□ -2.4
VIMP08670 RNU7-123P-201ENST00000515911 60 ntBASIC0.03□□□□□ -2.4
VIMP08670 MIR3646-201ENST00000578301 84 ntBASIC0.03□□□□□ -2.4
VIMP08670 MIR4752-201ENST00000579672 72 ntBASIC0.03□□□□□ -2.4
VIMP08670 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
VIMP08670 Y_RNA.274-201ENST00000364714 101 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNY1P2-201ENST00000364820 117 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNU6-239P-201ENST00000390990 99 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNU6-848P-201ENST00000515948 107 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNU6-617P-201ENST00000516147 107 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNU6-473P-201ENST00000516164 107 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNU6-1049P-201ENST00000516414 107 ntBASIC0.02□□□□□ -2.41
VIMP08670 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
VIMP08670 AC010487.4-201ENST00000637027 61 ntBASIC0.02□□□□□ -2.41
VIMP08670 RNU6-508P-201ENST00000363231 103 ntBASIC0.01□□□□□ -2.41
VIMP08670 Y_RNA.116-201ENST00000363292 103 ntBASIC0.01□□□□□ -2.41
VIMP08670 MIR1287-201ENST00000408492 90 ntBASIC0.01□□□□□ -2.41
VIMP08670 RNU4-69P-201ENST00000410677 143 ntBASIC0.01□□□□□ -2.41
VIMP08670 AC244505.6-201ENST00000452829 130 ntBASIC0.01□□□□□ -2.41
VIMP08670 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.01□□□□□ -2.41
VIMP08670 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms