Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MIR588-201ENST00000384900 83 ntBASIC1.31□□□□□ -2.2
USP1O94782 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
USP1O94782 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
USP1O94782 RNU7-62P-201ENST00000458856 62 ntBASIC1.31□□□□□ -2.2
USP1O94782 MIR2115-201ENST00000516657 100 ntBASIC1.31□□□□□ -2.2
USP1O94782 AC141846.1-201ENST00000568348 142 ntBASIC1.31□□□□□ -2.2
USP1O94782 MIR5009-201ENST00000578736 100 ntBASIC1.31□□□□□ -2.2
USP1O94782 Y_RNA.49-201ENST00000362714 112 ntBASIC1.3□□□□□ -2.2
USP1O94782 RNU4-67P-201ENST00000364569 141 ntBASIC1.3□□□□□ -2.2
USP1O94782 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
USP1O94782 MIR206-201ENST00000384872 86 ntBASIC1.3□□□□□ -2.2
USP1O94782 MIR605-201ENST00000385078 83 ntBASIC1.3□□□□□ -2.2
USP1O94782 RNA5SP237-201ENST00000410414 113 ntBASIC1.3□□□□□ -2.2
USP1O94782 SNORA7.5-201ENST00000410672 110 ntBASIC1.3□□□□□ -2.2
USP1O94782 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
USP1O94782 snoU13.2-201ENST00000459201 104 ntBASIC1.3□□□□□ -2.2
USP1O94782 snoU13.21-201ENST00000459368 105 ntBASIC1.3□□□□□ -2.2
USP1O94782 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
USP1O94782 RNU7-79P-201ENST00000516082 62 ntBASIC1.3□□□□□ -2.2
USP1O94782 AC141557.1-201ENST00000540982 400 ntBASIC1.3□□□□□ -2.2
USP1O94782 MIR4264-201ENST00000583520 66 ntBASIC1.3□□□□□ -2.2
USP1O94782 AC105081.1-201ENST00000617727 106 ntBASIC1.3□□□□□ -2.2
USP1O94782 SEPT14P17-201ENST00000617978 177 ntBASIC1.3□□□□□ -2.2
USP1O94782 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
USP1O94782 Y_RNA.155-201ENST00000363632 101 ntBASIC1.29□□□□□ -2.2
USP1O94782 RNY1P13-201ENST00000365030 105 ntBASIC1.29□□□□□ -2.2
USP1O94782 Y_RNA.309-201ENST00000365046 111 ntBASIC1.29□□□□□ -2.2
USP1O94782 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
USP1O94782 RNU6-613P-201ENST00000410412 108 ntBASIC1.29□□□□□ -2.2
USP1O94782 AL031737.1-201ENST00000450125 223 ntBASIC1.29□□□□□ -2.2
USP1O94782 RNU7-137P-201ENST00000516788 62 ntBASIC1.29□□□□□ -2.2
USP1O94782 MIR3613-201ENST00000579844 87 ntBASIC1.29□□□□□ -2.2
USP1O94782 AP000753.3-201ENST00000604083 169 ntBASIC1.29□□□□□ -2.2
USP1O94782 FAM71BP1-201ENST00000604431 523 ntBASIC1.29□□□□□ -2.2
USP1O94782 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USP1O94782 RNU6-679P-201ENST00000391003 106 ntBASIC1.28□□□□□ -2.2
USP1O94782 RNU6-1165P-201ENST00000410119 107 ntBASIC1.28□□□□□ -2.2
USP1O94782 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
USP1O94782 RNU6-521P-201ENST00000516663 105 ntBASIC1.28□□□□□ -2.2
USP1O94782 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
USP1O94782 Y_RNA.328-201ENST00000365208 113 ntBASIC1.27□□□□□ -2.21
USP1O94782 Y_RNA.360-201ENST00000365512 102 ntBASIC1.27□□□□□ -2.21
USP1O94782 RNU6-756P-201ENST00000383997 107 ntBASIC1.27□□□□□ -2.21
USP1O94782 Y_RNA.448-201ENST00000384185 108 ntBASIC1.27□□□□□ -2.21
USP1O94782 Y_RNA.507-201ENST00000384500 99 ntBASIC1.27□□□□□ -2.21
USP1O94782 SNORA2B-201ENST00000384583 137 ntBASIC1.27□□□□□ -2.21
USP1O94782 MIR563-201ENST00000385080 79 ntBASIC1.27□□□□□ -2.21
USP1O94782 MT-TN-201ENST00000387400 73 ntBASIC1.27□□□□□ -2.21
USP1O94782 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
USP1O94782 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.27□□□□□ -2.21
USP1O94782 AC015818.7-201ENST00000428754 109 ntBASIC1.27□□□□□ -2.21
USP1O94782 AC087499.7-201ENST00000441958 109 ntBASIC1.27□□□□□ -2.21
USP1O94782 RNU6-94P-201ENST00000607728 107 ntBASIC1.27□□□□□ -2.21
USP1O94782 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
USP1O94782 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.27□□□□□ -2.21
USP1O94782 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
USP1O94782 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USP1O94782 MIR30D-201ENST00000362283 70 ntBASIC1.26□□□□□ -2.21
USP1O94782 RNU6-363P-201ENST00000362895 105 ntBASIC1.26□□□□□ -2.21
USP1O94782 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
USP1O94782 SNORA51.5-201ENST00000384126 131 ntBASIC1.26□□□□□ -2.21
USP1O94782 RNU6-1321P-201ENST00000390905 107 ntBASIC1.26□□□□□ -2.21
USP1O94782 MIR1912-201ENST00000410389 80 ntBASIC1.26□□□□□ -2.21
USP1O94782 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
USP1O94782 RNU7-2P-201ENST00000516096 62 ntBASIC1.26□□□□□ -2.21
USP1O94782 AC023827.1-201ENST00000569247 97 ntBASIC1.26□□□□□ -2.21
USP1O94782 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.26□□□□□ -2.21
USP1O94782 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
USP1O94782 Y_RNA.226-201ENST00000364337 114 ntBASIC1.25□□□□□ -2.21
USP1O94782 SNORA25.9-201ENST00000365087 128 ntBASIC1.25□□□□□ -2.21
USP1O94782 RNU6-409P-201ENST00000384114 104 ntBASIC1.25□□□□□ -2.21
USP1O94782 MIR590-201ENST00000385008 97 ntBASIC1.25□□□□□ -2.21
USP1O94782 MIR577-201ENST00000385196 96 ntBASIC1.25□□□□□ -2.21
USP1O94782 MIR1302-5-201ENST00000408164 150 ntBASIC1.25□□□□□ -2.21
USP1O94782 RNU6-733P-201ENST00000410759 104 ntBASIC1.25□□□□□ -2.21
USP1O94782 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.25□□□□□ -2.21
USP1O94782 AC002429.1-201ENST00000437672 148 ntBASIC1.25□□□□□ -2.21
USP1O94782 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.25□□□□□ -2.21
USP1O94782 RNU6-109P-201ENST00000516364 107 ntBASIC1.25□□□□□ -2.21
USP1O94782 RNU6-184P-201ENST00000516514 107 ntBASIC1.25□□□□□ -2.21
USP1O94782 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
USP1O94782 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
USP1O94782 RNU6-766P-201ENST00000362478 107 ntBASIC1.24□□□□□ -2.21
USP1O94782 SNORD115-35-201ENST00000365122 82 ntBASIC1.24□□□□□ -2.21
USP1O94782 MIR34C-201ENST00000384831 77 ntBASIC1.24□□□□□ -2.21
USP1O94782 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
USP1O94782 RNA5SP89-201ENST00000410300 108 ntBASIC1.24□□□□□ -2.21
USP1O94782 Y_RNA.247-201ENST00000364500 92 ntBASIC1.23□□□□□ -2.21
USP1O94782 RNU6-949P-201ENST00000384040 107 ntBASIC1.23□□□□□ -2.21
USP1O94782 RNU6-1201P-201ENST00000384227 107 ntBASIC1.23□□□□□ -2.21
USP1O94782 Y_RNA.495-201ENST00000384435 112 ntBASIC1.23□□□□□ -2.21
USP1O94782 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
USP1O94782 SNORD83.1-201ENST00000411362 77 ntBASIC1.23□□□□□ -2.21
USP1O94782 AC096949.1-201ENST00000412047 152 ntBASIC1.23□□□□□ -2.21
USP1O94782 UBL5P1-201ENST00000507979 193 ntBASIC1.23□□□□□ -2.21
USP1O94782 RNU6-537P-201ENST00000517277 103 ntBASIC1.23□□□□□ -2.21
USP1O94782 SNORA4-201ENST00000584302 138 ntBASIC1.23□□□□□ -2.21
USP1O94782 Y_RNA.168-201ENST00000363740 102 ntBASIC1.22□□□□□ -2.21
USP1O94782 U8.15-201ENST00000390947 134 ntBASIC1.22□□□□□ -2.21
USP1O94782 MIR1287-201ENST00000408492 90 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 263.5 ms