Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNU7-35P-201ENST00000517174 62 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 AL360085.1-201ENST00000604713 532 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 MIR6755-201ENST00000619993 66 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
TRIM3O75382 RNU6-1099P-201ENST00000363533 107 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 Y_RNA.476-201ENST00000384347 108 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 RNU6-1011P-201ENST00000384668 107 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 RNU6-135P-201ENST00000516769 101 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 MIR3128-201ENST00000581957 66 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 MIR4639-201ENST00000584938 69 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 AC244669.1-204ENST00000621564 178 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 U6.109-201ENST00000636749 87 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 AC091304.10-201ENST00000641554 121 ntBASIC0.07□□□□□ -2.4
TRIM3O75382 Y_RNA.20-201ENST00000362479 113 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 SNORA63.5-201ENST00000363548 123 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 Y_RNA.556-201ENST00000384677 113 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 SNORD58.1-201ENST00000391313 66 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 MTCYBP9-201ENST00000431021 303 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.06□□□□□ -2.4
TRIM3O75382 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 TUG1_4.1-201ENST00000619464 181 ntBASIC0.06□□□□□ -2.4
TRIM3O75382 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
TRIM3O75382 RNU4-58P-201ENST00000363192 141 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 Y_RNA.120-201ENST00000363304 110 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 RNU6-1082P-201ENST00000364574 107 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 RNU6-690P-201ENST00000365242 106 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 RNU6-716P-201ENST00000365621 103 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
TRIM3O75382 RNA5SP63-201ENST00000391225 112 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 PCNPP3-201ENST00000393579 471 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 MIR1302-3-201ENST00000408128 138 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 RNU7-129P-201ENST00000516128 62 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 Y_RNA.668-201ENST00000516233 93 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 Y_RNA.680-201ENST00000516441 93 ntBASIC0.05□□□□□ -2.4
TRIM3O75382 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 Y_RNA.49-201ENST00000362714 112 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 Y_RNA.133-201ENST00000363428 110 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 Y_RNA.350-201ENST00000365409 98 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 RNU6-768P-201ENST00000384683 107 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 RNA5SP236-201ENST00000516169 116 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 RNU6-327P-201ENST00000516270 127 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 MIR4752-201ENST00000579672 72 ntBASIC0.04□□□□□ -2.4
TRIM3O75382 MIR101-2-201ENST00000362195 79 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 Y_RNA.60-201ENST00000362831 98 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 Y_RNA.75-201ENST00000362927 97 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 RNA5SP457-201ENST00000363657 124 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 MIRLET7F2-201ENST00000385277 83 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 RNU6-918P-201ENST00000391219 106 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 RNU4-71P-201ENST00000516258 113 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 SNORD67.1-201ENST00000516618 108 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 RNU6-111P-201ENST00000517179 105 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 AC138749.4-201ENST00000563970 127 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 MIR548AE2-201ENST00000583456 67 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 AC062037.2-201ENST00000610137 73 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 MIR2909-201ENST00000617113 69 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 AC105081.1-201ENST00000617727 106 ntBASIC0.03□□□□□ -2.4
TRIM3O75382 SNORD115-2-201ENST00000362842 82 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 Y_RNA.115-201ENST00000363272 98 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 RNU6-694P-201ENST00000364071 147 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 SNORD115-20-201ENST00000365099 82 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 Y_RNA.366-201ENST00000365540 102 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 Y_RNA.478-201ENST00000384358 107 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 RNU2-35P-201ENST00000516446 142 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 RNU7-137P-201ENST00000516788 62 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 MIR4305-201ENST00000583252 102 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 AL359881.1-201ENST00000602916 267 ntBASIC0.02□□□□□ -2.41
TRIM3O75382 Y_RNA.119-201ENST00000363301 96 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 RNU6-47P-201ENST00000383866 107 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 Y_RNA.531-201ENST00000384589 121 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 MIR760-201ENST00000390220 80 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 AL118496.2-201ENST00000448300 230 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 RNU6-240P-201ENST00000516098 97 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 AL109933.3-201ENST00000619095 188 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
TRIM3O75382 SNORD115-24-201ENST00000363528 82 ntBASIC0□□□□□ -2.41
TRIM3O75382 SNORA20.1-201ENST00000364790 130 ntBASIC0□□□□□ -2.41
TRIM3O75382 RNU6-818P-201ENST00000364837 108 ntBASIC0□□□□□ -2.41
TRIM3O75382 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 RNU6-702P-201ENST00000364982 107 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 RNU6-302P-201ENST00000365249 107 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 MIR643-201ENST00000385267 97 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 RNU6-127P-201ENST00000390897 107 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 MIR5190-201ENST00000581537 80 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 AC021443.1-201ENST00000604478 211 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
TRIM3O75382 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
TRIM3O75382 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.02□□□□□ -2.41
TRIM3O75382 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
TRIM3O75382 RNA5SP325-201ENST00000363756 130 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms