Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
NPHP4O75161 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.47□□□□□ -2.48
NPHP4O75161 AC244505.6-201ENST00000452829 130 ntBASIC-0.47□□□□□ -2.48
NPHP4O75161 AC011921.3-201ENST00000605540 361 ntBASIC-0.47□□□□□ -2.48
NPHP4O75161 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 SNORA32-201ENST00000384072 121 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 MIR616-201ENST00000385293 97 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 RNU6-138P-201ENST00000515952 107 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 RNU7-35P-201ENST00000517174 62 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 AC006504.6-201ENST00000590142 199 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 U7.6-201ENST00000610841 64 ntBASIC-0.47□□□□□ -2.49
NPHP4O75161 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 AC096531.1-201ENST00000419107 107 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.48□□□□□ -2.49
NPHP4O75161 SERF1AP1-201ENST00000514575 187 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 SCARNA15-202ENST00000516881 127 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 MIR4795-201ENST00000584182 89 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 AL365205.2-201ENST00000594586 68 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.48□□□□□ -2.49
NPHP4O75161 AC105081.1-201ENST00000617727 106 ntBASIC-0.48□□□□□ -2.49
NPHP4O75161 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.49□□□□□ -2.49
NPHP4O75161 RNY1P2-201ENST00000364820 117 ntBASIC-0.49□□□□□ -2.49
NPHP4O75161 RNU4-70P-201ENST00000384579 139 ntBASIC-0.49□□□□□ -2.49
NPHP4O75161 MIR378D2-201ENST00000580636 98 ntBASIC-0.49□□□□□ -2.49
NPHP4O75161 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.49□□□□□ -2.49
NPHP4O75161 RN7SL660P-201ENST00000614852 299 ntBASIC-0.49□□□□□ -2.49
NPHP4O75161 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 SNORD110-201ENST00000408189 75 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 SNORD67.1-201ENST00000516618 108 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 RNA5SP33-201ENST00000516687 98 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 AL356055.1-201ENST00000602528 446 ntBASIC-0.5□□□□□ -2.49
NPHP4O75161 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.5□□□□□ -2.49
NPHP4O75161 RNA5SP403-201ENST00000363598 108 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 SNORA75.1-201ENST00000391130 148 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 SNORA79-201ENST00000408376 140 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 NAMPTP3-201ENST00000569273 224 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 AL359881.1-201ENST00000602916 267 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 AC084368.1-201ENST00000620935 65 ntBASIC-0.51□□□□□ -2.49
NPHP4O75161 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 SNORD41.1-201ENST00000391000 69 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 AC006210.1-201ENST00000424882 111 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 BX276092.1-201ENST00000427368 251 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 MTATP6P23-201ENST00000440153 476 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 RNU6-893P-201ENST00000458841 100 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 RNU7-113P-201ENST00000459273 62 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 CR383656.4-201ENST00000546909 122 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 AC073869.9-201ENST00000641610 120 ntBASIC-0.52□□□□□ -2.49
NPHP4O75161 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.53□□□□□ -2.49
NPHP4O75161 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.53□□□□□ -2.49
NPHP4O75161 RNA5SP144-201ENST00000410846 116 ntBASIC-0.53□□□□□ -2.49
NPHP4O75161 RNA5SP484-201ENST00000458857 111 ntBASIC-0.53□□□□□ -2.49
NPHP4O75161 RNU7-137P-201ENST00000516788 62 ntBASIC-0.53□□□□□ -2.49
NPHP4O75161 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
NPHP4O75161 RNU6-728P-201ENST00000365375 104 ntBASIC-0.54□□□□□ -2.5
NPHP4O75161 AL442663.2-201ENST00000554385 511 ntBASIC-0.54□□□□□ -2.5
NPHP4O75161 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.54□□□□□ -2.5
NPHP4O75161 RNU6-865P-201ENST00000364772 107 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MIR516B1-201ENST00000385211 90 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 RNU6-381P-201ENST00000391259 108 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 TRAJ51-201ENST00000504127 63 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MIR548H5-201ENST00000580314 60 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 SNORD42.2-201ENST00000365570 69 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MIR599-201ENST00000385069 95 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MTND3P22-201ENST00000510932 243 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 RNU6-570P-201ENST00000517051 105 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 AL365265.1-201ENST00000621045 234 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 MIR198-201ENST00000637333 62 ntBASIC-0.55□□□□□ -2.5
NPHP4O75161 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 RNY1P6-201ENST00000384193 109 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 SNORD116-25-201ENST00000516517 92 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 MIR4500-201ENST00000579472 76 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 MIR548AE2-201ENST00000583456 67 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.56□□□□□ -2.5
NPHP4O75161 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.57□□□□□ -2.5
NPHP4O75161 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.57□□□□□ -2.5
NPHP4O75161 RNU6-978P-201ENST00000364371 103 ntBASIC-0.57□□□□□ -2.5
NPHP4O75161 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.57□□□□□ -2.5
NPHP4O75161 MIR601-201ENST00000385256 79 ntBASIC-0.57□□□□□ -2.5
NPHP4O75161 MIR876-201ENST00000401147 81 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms