Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU7-41P-201ENST00000515917 61 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 CYP3A52P-201ENST00000563326 91 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 MIR3134-201ENST00000579433 74 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 MIR548AO-201ENST00000579992 96 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTCD1O75127 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PTCD1O75127 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PTCD1O75127 RNU6-602P-201ENST00000411155 105 ntBASIC2.48□□□□□ -2.01
PTCD1O75127 RNU7-48P-201ENST00000458875 63 ntBASIC2.48□□□□□ -2.01
PTCD1O75127 SNORD111.1-201ENST00000516421 86 ntBASIC2.48□□□□□ -2.01
PTCD1O75127 MIR8081-201ENST00000611533 95 ntBASIC2.48□□□□□ -2.01
PTCD1O75127 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PTCD1O75127 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTCD1O75127 RNU4-32P-201ENST00000363404 141 ntBASIC2.47□□□□□ -2.01
PTCD1O75127 Y_RNA.354-201ENST00000365448 111 ntBASIC2.47□□□□□ -2.01
PTCD1O75127 RNU4-83P-201ENST00000410863 133 ntBASIC2.47□□□□□ -2.01
PTCD1O75127 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.47□□□□□ -2.01
PTCD1O75127 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
PTCD1O75127 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PTCD1O75127 SNORD115-37-201ENST00000363768 82 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 Y_RNA.532-201ENST00000384590 113 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 RNU6-519P-201ENST00000410590 108 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 RNA5SP247-201ENST00000411181 105 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 RNU7-85P-201ENST00000458851 63 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 SNORD4B-201ENST00000459083 72 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 Z97988.1-201ENST00000637697 135 ntBASIC2.46□□□□□ -2.02
PTCD1O75127 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PTCD1O75127 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
PTCD1O75127 RNU6-624P-201ENST00000363411 107 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 RNA5SP190-201ENST00000365222 118 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 RNU6-1237P-201ENST00000384777 107 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 SNORD13-201ENST00000459299 104 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 MTND5P40-201ENST00000559945 246 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 MIR4498-201ENST00000577599 66 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 MIR4713-201ENST00000582691 75 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 MIR3935-201ENST00000583472 104 ntBASIC2.45□□□□□ -2.02
PTCD1O75127 SNORD114-10-201ENST00000363409 72 ntBASIC2.44□□□□□ -2.02
PTCD1O75127 RNY1P13-201ENST00000365030 105 ntBASIC2.44□□□□□ -2.02
PTCD1O75127 AC005908.1-201ENST00000468701 347 ntBASIC2.44□□□□□ -2.02
PTCD1O75127 MIR4299-201ENST00000577899 72 ntBASIC2.44□□□□□ -2.02
PTCD1O75127 MIR8074-201ENST00000615081 81 ntBASIC2.44□□□□□ -2.02
PTCD1O75127 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.44□□□□□ -2.02
PTCD1O75127 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTCD1O75127 AC008163.1-202ENST00000636004 2889 ntBASIC2.43□□□□□ -2.02
PTCD1O75127 MIR9-3-201ENST00000385084 90 ntBASIC2.43□□□□□ -2.02
PTCD1O75127 SNORD41-201ENST00000386967 70 ntBASIC2.43□□□□□ -2.02
PTCD1O75127 RPS29P11-201ENST00000496507 171 ntBASIC2.43□□□□□ -2.02
PTCD1O75127 RNA5SP445-201ENST00000515889 115 ntBASIC2.43□□□□□ -2.02
PTCD1O75127 AC084768.2-201ENST00000622736 221 ntBASIC2.43□□□□□ -2.02
PTCD1O75127 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.43□□□□□ -2.02
PTCD1O75127 Y_RNA.168-201ENST00000363740 102 ntBASIC2.42□□□□□ -2.02
PTCD1O75127 AC009474.2-201ENST00000451383 136 ntBASIC2.42□□□□□ -2.02
PTCD1O75127 SNORA25.15-201ENST00000516487 89 ntBASIC2.42□□□□□ -2.02
PTCD1O75127 SNORA77B-201ENST00000578179 125 ntBASIC2.42□□□□□ -2.02
PTCD1O75127 MIR8063-201ENST00000621930 81 ntBASIC2.42□□□□□ -2.02
PTCD1O75127 AP001362.1-201ENST00000625165 124 ntBASIC2.42□□□□□ -2.02
PTCD1O75127 MIRLET7A1-201ENST00000362295 80 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 Y_RNA.98-201ENST00000363109 102 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 RNU6-590P-201ENST00000365039 107 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 SNORD38B-201ENST00000384690 67 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 MIR1236-201ENST00000408340 102 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 RNU6-1053P-201ENST00000515930 101 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 RNU6-947P-201ENST00000516264 106 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 AC015688.6-201ENST00000577737 104 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PTCD1O75127 SNORD38B-202ENST00000625943 69 ntBASIC2.41□□□□□ -2.02
PTCD1O75127 HSBP1P2-201ENST00000299671 229 ntBASIC2.4□□□□□ -2.03
PTCD1O75127 RNA5SP48-201ENST00000363969 126 ntBASIC2.4□□□□□ -2.03
PTCD1O75127 RNU6-480P-201ENST00000384332 107 ntBASIC2.4□□□□□ -2.03
PTCD1O75127 AC090897.1-201ENST00000580909 226 ntBASIC2.4□□□□□ -2.03
PTCD1O75127 AL357312.1-201ENST00000603879 298 ntBASIC2.4□□□□□ -2.03
PTCD1O75127 RNU6-1094P-201ENST00000362416 104 ntBASIC2.39□□□□□ -2.03
PTCD1O75127 RNA5SP292-201ENST00000390974 118 ntBASIC2.39□□□□□ -2.03
PTCD1O75127 RNU6-1015P-201ENST00000517121 99 ntBASIC2.39□□□□□ -2.03
PTCD1O75127 MIR3192-201ENST00000584920 77 ntBASIC2.39□□□□□ -2.03
PTCD1O75127 WWP1P1-201ENST00000466609 2769 ntBASIC2.39□□□□□ -2.03
PTCD1O75127 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PTCD1O75127 SNORA63.2-201ENST00000362603 126 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 RNU6-161P-201ENST00000363051 106 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 MIR17-201ENST00000385012 84 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 MIR1265-201ENST00000408444 86 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 RNU6-1108P-201ENST00000516308 104 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 RNU6-539P-201ENST00000516665 103 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 AC141846.1-201ENST00000568348 142 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 AL096861.1-201ENST00000610899 123 ntBASIC2.38□□□□□ -2.03
PTCD1O75127 MIR378A-201ENST00000362177 66 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 Y_RNA.508-201ENST00000384502 114 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-447P-201ENST00000410293 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-1118P-201ENST00000410382 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-1076P-201ENST00000410397 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-355P-201ENST00000410427 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-791P-201ENST00000410467 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-705P-201ENST00000410601 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-1100P-201ENST00000410691 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-860P-201ENST00000410860 104 ntBASIC2.37□□□□□ -2.03
PTCD1O75127 RNU6-1217P-201ENST00000411276 104 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms