Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RNU6-1313P-201ENST00000362622 102 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 RNU6-524P-201ENST00000384270 107 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 RNU6-1307P-201ENST00000391012 103 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 SNORA26.6-201ENST00000391256 115 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 AC090844.1-201ENST00000422019 156 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 RNU7-45P-201ENST00000459460 63 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 AC020891.4-201ENST00000605745 93 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 AC022709.1-201ENST00000615967 87 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 MIR6515-201ENST00000619843 57 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 Y_RNA.788-201ENST00000622394 112 ntBASIC2.26□□□□□ -2.05
GRIN3BO60391 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
GRIN3BO60391 RNU6-1163P-201ENST00000364516 107 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 RNA5SP233-201ENST00000459153 113 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 snoU13.16-201ENST00000459350 104 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 RNU6-322P-201ENST00000516010 103 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 MIR548AE2-201ENST00000583456 67 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 AL020996.3-201ENST00000606617 222 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 AC103810.7-201ENST00000607821 91 ntBASIC2.25□□□□□ -2.05
GRIN3BO60391 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
GRIN3BO60391 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
GRIN3BO60391 SNORD114-22-201ENST00000365423 72 ntBASIC2.24□□□□□ -2.05
GRIN3BO60391 RNU6-342P-201ENST00000384521 104 ntBASIC2.24□□□□□ -2.05
GRIN3BO60391 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
GRIN3BO60391 RNU6-613P-201ENST00000410412 108 ntBASIC2.24□□□□□ -2.05
GRIN3BO60391 MIR4713-201ENST00000582691 75 ntBASIC2.24□□□□□ -2.05
GRIN3BO60391 AC145423.2-201ENST00000610631 239 ntBASIC2.24□□□□□ -2.05
GRIN3BO60391 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 SNORD115-2-201ENST00000362842 82 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 Y_RNA.96-201ENST00000363092 109 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 Y_RNA.299-201ENST00000364973 94 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 SNORD115-20-201ENST00000365099 82 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 MIR513A1-201ENST00000385138 129 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 RNU6-913P-201ENST00000390913 95 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 Y_RNA.609-201ENST00000410669 89 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 RPS27P21-201ENST00000486977 252 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 MIR4764-201ENST00000580680 88 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 MIR6717-201ENST00000622747 73 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 AC008133.2-201ENST00000624540 351 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
GRIN3BO60391 SNORA22.1-201ENST00000362701 134 ntBASIC2.22□□□□□ -2.05
GRIN3BO60391 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.22□□□□□ -2.05
GRIN3BO60391 MIR4439-201ENST00000583746 80 ntBASIC2.22□□□□□ -2.05
GRIN3BO60391 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
GRIN3BO60391 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.21□□□□□ -2.06
GRIN3BO60391 PVT1_3.1-201ENST00000620853 95 ntBASIC2.21□□□□□ -2.06
GRIN3BO60391 SNORA1.1-201ENST00000364671 133 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 RNU6-439P-201ENST00000384188 106 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 MIR520C-201ENST00000385005 87 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
GRIN3BO60391 RNU6-1190P-201ENST00000410811 104 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 RNU7-113P-201ENST00000459273 62 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 RPS29P11-201ENST00000496507 171 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 AC114801.3-201ENST00000510231 177 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 AC140658.3-201ENST00000567603 271 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 RNU6-86P-201ENST00000606534 107 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 MIR8055-201ENST00000610739 97 ntBASIC2.2□□□□□ -2.06
GRIN3BO60391 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
GRIN3BO60391 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
GRIN3BO60391 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
GRIN3BO60391 RNU6-1244P-201ENST00000363614 108 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 SNORA7.1-201ENST00000363750 139 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 RNU6-478P-201ENST00000363904 110 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 RNA5SP259-201ENST00000365541 109 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 AC015688.6-201ENST00000577737 104 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 SNORA77B-201ENST00000578179 125 ntBASIC2.19□□□□□ -2.06
GRIN3BO60391 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
GRIN3BO60391 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
GRIN3BO60391 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
GRIN3BO60391 SNORD53B-201ENST00000577887 78 ntBASIC2.18□□□□□ -2.06
GRIN3BO60391 MIR4299-201ENST00000577899 72 ntBASIC2.18□□□□□ -2.06
GRIN3BO60391 AL627230.6-201ENST00000611129 280 ntBASIC2.18□□□□□ -2.06
GRIN3BO60391 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
GRIN3BO60391 Z97988.1-201ENST00000637697 135 ntBASIC2.18□□□□□ -2.06
GRIN3BO60391 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
GRIN3BO60391 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
GRIN3BO60391 RPL31P63-201ENST00000422565 375 ntBASIC2.17□□□□□ -2.06
GRIN3BO60391 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.17□□□□□ -2.06
GRIN3BO60391 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.17□□□□□ -2.06
GRIN3BO60391 AL512310.12-203ENST00000640543 90 ntBASIC2.17□□□□□ -2.06
GRIN3BO60391 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
GRIN3BO60391 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
GRIN3BO60391 Y_RNA.354-201ENST00000365448 111 ntBASIC2.16□□□□□ -2.06
GRIN3BO60391 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
GRIN3BO60391 MIR4285-201ENST00000581001 85 ntBASIC2.16□□□□□ -2.06
GRIN3BO60391 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.16□□□□□ -2.06
GRIN3BO60391 RNU6-590P-201ENST00000365039 107 ntBASIC2.15□□□□□ -2.07
GRIN3BO60391 SNORA32-201ENST00000384072 121 ntBASIC2.15□□□□□ -2.07
GRIN3BO60391 MIR34C-201ENST00000384831 77 ntBASIC2.15□□□□□ -2.07
GRIN3BO60391 SNORD41-201ENST00000386967 70 ntBASIC2.15□□□□□ -2.07
GRIN3BO60391 AC093729.1-201ENST00000513074 128 ntBASIC2.15□□□□□ -2.07
GRIN3BO60391 RNU7-153P-201ENST00000516455 62 ntBASIC2.15□□□□□ -2.07
GRIN3BO60391 RNA5SP33-201ENST00000516687 98 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms