Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR4771-2-201ENST00000577758 74 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 MIR4771-1-201ENST00000582617 74 ntBASIC1.32□□□□□ -2.2
KDM1AO60341 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KDM1AO60341 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KDM1AO60341 Y_RNA.49-201ENST00000362714 112 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU4-67P-201ENST00000364569 141 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 Y_RNA.507-201ENST00000384500 99 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-816P-201ENST00000390914 107 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-1268P-201ENST00000391214 107 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-1239P-201ENST00000391310 107 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 MIR1257-201ENST00000408490 117 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-447P-201ENST00000410293 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-1118P-201ENST00000410382 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-1076P-201ENST00000410397 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-355P-201ENST00000410427 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-791P-201ENST00000410467 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-705P-201ENST00000410601 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-1100P-201ENST00000410691 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-860P-201ENST00000410860 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-1217P-201ENST00000411276 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RNU6-785P-201ENST00000411324 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 BTF3P4-201ENST00000418852 495 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 Y_RNA.709-201ENST00000516952 92 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 U6.90-201ENST00000614007 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 U6.70-201ENST00000620287 104 ntBASIC1.31□□□□□ -2.2
KDM1AO60341 AC023934.1-201ENST00000574529 2389 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 RNU6-363P-201ENST00000362895 105 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 SNORD115-35-201ENST00000365122 82 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 Y_RNA.448-201ENST00000384185 108 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 SNORD20-201ENST00000384550 80 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 AP1B1P2-201ENST00000416196 106 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 RPS26P5-201ENST00000418544 335 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 RNU7-185P-201ENST00000459215 60 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 AC105081.1-201ENST00000617727 106 ntBASIC1.3□□□□□ -2.2
KDM1AO60341 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KDM1AO60341 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 AC096949.1-201ENST00000412047 152 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 AC015818.7-201ENST00000428754 109 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 AC087499.7-201ENST00000441958 109 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 snoU13.31-201ENST00000607291 104 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
KDM1AO60341 Y_RNA.155-201ENST00000363632 101 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6-1107P-201ENST00000364817 104 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU1-36P-201ENST00000365130 165 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 MIR200A-201ENST00000384875 90 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6-1321P-201ENST00000390905 107 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6-1307P-201ENST00000391012 103 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 SNORD93-201ENST00000408813 74 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 AC108729.3-201ENST00000513484 108 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6-521P-201ENST00000516663 105 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6-919P-201ENST00000516731 104 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 AC068339.1-201ENST00000526965 141 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
KDM1AO60341 RNU6-865P-201ENST00000364772 107 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 U8.6-201ENST00000364939 135 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 Y_RNA.323-201ENST00000365157 109 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 RNU6-409P-201ENST00000384114 104 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 SNORA7.5-201ENST00000410672 110 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 RNU7-48P-201ENST00000458875 63 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 MIR5009-201ENST00000578736 100 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.27□□□□□ -2.21
KDM1AO60341 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
KDM1AO60341 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
KDM1AO60341 RNA5SP432-201ENST00000362480 116 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 RNU6-369P-201ENST00000362515 102 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 MIR100-201ENST00000385259 80 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 RNY4P18-201ENST00000391107 89 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 RNU6-733P-201ENST00000410759 104 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 MIR4676-201ENST00000583078 72 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 AC020891.4-201ENST00000605745 93 ntBASIC1.26□□□□□ -2.21
KDM1AO60341 MIR1-1-201ENST00000362147 71 ntBASIC1.25□□□□□ -2.21
KDM1AO60341 MIR125B2-201ENST00000385128 89 ntBASIC1.25□□□□□ -2.21
KDM1AO60341 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
KDM1AO60341 SNORD124-201ENST00000459577 104 ntBASIC1.25□□□□□ -2.21
KDM1AO60341 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
KDM1AO60341 Y_RNA.98-201ENST00000363109 102 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 RNY1P2-201ENST00000364820 117 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 Y_RNA.328-201ENST00000365208 113 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 RNU6-1014P-201ENST00000383940 103 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KDM1AO60341 RNU6-679P-201ENST00000391003 106 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 Y_RNA.588-201ENST00000391254 102 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 MIR942-201ENST00000401111 86 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 RNU4-83P-201ENST00000410863 133 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 AL035461.1-201ENST00000421490 332 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 AL353813.1-201ENST00000440700 253 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 341.8 ms