Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 RNU6-713P-201ENST00000384761 107 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 AL022718.1-201ENST00000412004 84 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 AC108059.2-201ENST00000434626 151 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 RNU7-165P-201ENST00000458864 60 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 AC104692.1-201ENST00000472406 90 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 RNA5SP33-201ENST00000516687 98 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 RNU7-161P-201ENST00000517289 62 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 MIR548AD-201ENST00000584780 82 ntBASIC-0.29□□□□□ -2.46
CLDN3O15551 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 RNU6-578P-201ENST00000390980 103 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 MIR4643-201ENST00000577473 78 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 U7.6-201ENST00000610841 64 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 SNORA70.25-201ENST00000612741 95 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.3□□□□□ -2.46
CLDN3O15551 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.3□□□□□ -2.46
CLDN3O15551 SNORA33.2-201ENST00000365413 134 ntBASIC-0.31□□□□□ -2.46
CLDN3O15551 SNORA32-201ENST00000384072 121 ntBASIC-0.31□□□□□ -2.46
CLDN3O15551 SNORD67.1-201ENST00000516618 108 ntBASIC-0.31□□□□□ -2.46
CLDN3O15551 RNU7-137P-201ENST00000516788 62 ntBASIC-0.31□□□□□ -2.46
CLDN3O15551 AC011921.3-201ENST00000605540 361 ntBASIC-0.31□□□□□ -2.46
CLDN3O15551 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 RNA5SP163-201ENST00000410304 99 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 RNA5SP285-201ENST00000516619 119 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 MIR548H5-201ENST00000580314 60 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.32□□□□□ -2.46
CLDN3O15551 AC006504.6-201ENST00000590142 199 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 AC098479.1-201ENST00000609225 154 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 U6.104-201ENST00000637979 90 ntBASIC-0.32□□□□□ -2.46
CLDN3O15551 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 SNORD114-10-201ENST00000363409 72 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 SNORA25.7-201ENST00000364375 127 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 RNU6-639P-201ENST00000384074 107 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 MT-TW-201ENST00000387382 68 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 MIR1302-6-201ENST00000408466 90 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 RNU7-104P-201ENST00000459398 79 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.33□□□□□ -2.46
CLDN3O15551 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 RNA5SP403-201ENST00000363598 108 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 MTND4LP11-201ENST00000422184 280 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 RNY3P16-201ENST00000516338 101 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.34□□□□□ -2.46
CLDN3O15551 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 MIR548AE2-201ENST00000583456 67 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 AL356055.1-201ENST00000602528 446 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 AL359881.1-201ENST00000602916 267 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 RNU2-4P-201ENST00000606190 192 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 MIR8062-201ENST00000621515 85 ntBASIC-0.34□□□□□ -2.46
CLDN3O15551 RNY1P2-201ENST00000364820 117 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 RNU6-643P-201ENST00000384018 107 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 RNU6-429P-201ENST00000384582 108 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 SNORD41.1-201ENST00000391000 69 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 MIR4677-201ENST00000584153 80 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 MIR3925-201ENST00000584674 77 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 uc_338.28-201ENST00000612082 187 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 AC105081.1-201ENST00000617727 106 ntBASIC-0.35□□□□□ -2.47
CLDN3O15551 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 RNU6-635P-201ENST00000516651 102 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 IGLVI-20-201ENST00000519296 130 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 RNU7-10P-201ENST00000607194 63 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 AC073869.9-201ENST00000641610 120 ntBASIC-0.36□□□□□ -2.47
CLDN3O15551 RNU6-238P-201ENST00000363313 106 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 RNU6-923P-201ENST00000364753 107 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 MTCYBP6-201ENST00000441810 138 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 AL117351.2-201ENST00000513571 157 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.37□□□□□ -2.47
CLDN3O15551 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.38□□□□□ -2.47
CLDN3O15551 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.38□□□□□ -2.47
CLDN3O15551 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.38□□□□□ -2.47
CLDN3O15551 MIR6759-201ENST00000638110 65 ntBASIC-0.38□□□□□ -2.47
CLDN3O15551 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 RNU6-449P-201ENST00000383914 107 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 MIR635-201ENST00000384830 98 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 RNU6-493P-201ENST00000391321 108 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 SNORD4A-201ENST00000459174 72 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 RNA5SP236-201ENST00000516169 116 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 RNU2-60P-201ENST00000517290 128 ntBASIC-0.39□□□□□ -2.47
CLDN3O15551 SNORD114-31-201ENST00000363219 75 ntBASIC-0.4□□□□□ -2.47
CLDN3O15551 RNU6-690P-201ENST00000365242 106 ntBASIC-0.4□□□□□ -2.47
CLDN3O15551 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms